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Updated: May 5, 2026

Genome-wide Screen for miRNA Targets Using the MISSION Target ID Library
Published on: April 6, 2012
Prometastatic GPCR CD97 is a direct target of tumor suppressor microRNA-126
Ying Y Lu1, Michael J Sweredoski, David Huss
1Division of Chemistry and Chemical Engineering, MC 210-41, California Institute of Technology , 1200 East California Boulevard, Pasadena, California 91125, United States.
Abstract:
Tumor suppressor microRNA-126 (miR-126) is often down-regulated in cancer cells, and its overexpression is found to inhibit cancer metastasis. To elucidate the mechanism of tumor suppression by miR-126, we analyzed the proteomic response to miR-126 overexpression in the human metastatic breast cancer cell line MDA-MB-231. To acquire quantitative, time-resolved information, we combined two complementary proteomic methods, BONCAT and SILAC. We discovered a new direct target of miR-126: CD97, a pro-metastatic G-protein-coupled receptor (GPCR) that has been reported to promote tumor cell invasion, endothelial cell migration, and tumor angiogenesis. This discovery establishes a link between down-regulation of miR-126 and overexpression of CD97 in cancer and provides new mechanistic insight into the role of miR-126 in inhibiting both cell-autonomous and non-cell-autonomous cancer progression.
Insights
MicroRNA-126 (miR-126) suppresses tumors by inhibiting metastasis. Researchers found miR-126 directly targets CD97, a receptor promoting cancer spread, revealing a new mechanism for miR-126
Area of Science:
- Molecular Biology
- Cancer Research
- Proteomics
Background:
- MicroRNA-126 (miR-126) functions as a tumor suppressor, frequently downregulated in various cancers.
- Downregulation of miR-126 correlates with increased cancer metastasis, highlighting its inhibitory role.
- The precise molecular mechanisms underlying miR-126's tumor suppressive functions remain incompletely understood.
Purpose of the Study:
- To elucidate the molecular mechanisms by which miR-126 suppresses tumors.
- To identify direct molecular targets of miR-126 in metastatic breast cancer cells.
- To investigate the proteomic alterations induced by miR-126 overexpression.
Main Methods:
- Utilized the human metastatic breast cancer cell line MDA-MB-231 for experiments.
- Employed combined BONCAT and SILAC proteomic techniques for quantitative, time-resolved analysis.
- Analyzed the proteomic response to miR-126 overexpression.
Main Results:
- Identified CD97, a G-protein-coupled receptor (GPCR), as a novel direct target of miR-126.
- Demonstrated that CD97 is a pro-metastatic factor involved in tumor cell invasion, endothelial cell migration, and angiogenesis.
- Established a direct link between miR-126 downregulation and CD97 overexpression in cancer.
Conclusions:
- miR-126 directly targets and inhibits the pro-metastatic receptor CD97.
- This interaction provides a mechanistic explanation for miR-126's role in suppressing both cell-autonomous and non-cell-autonomous cancer progression.
- The findings offer new therapeutic targets for inhibiting cancer metastasis by modulating the miR-126/CD97 axis.
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