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Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions
Published on: August 2, 2018
Inhibition of hypoxia-induced gene transcription by substituted pyrazolyl oxadiazoles: initial lead generation and
Michael Härter1, Karl-Heinz Thierauch, Stephen Boyer
1Department of Medicinal Chemistry, Bayer HealthCare Pharmaceuticals, Global Drug Discovery, Postfach 101709, 42096 Wuppertal (Germany). michael.haerter@bayer.com.
Abstract:
The transcription factors hypoxia-inducible factor-1 and -2 (HIF-1 and HIF-2) orchestrate a multitude of processes that allow tumor cells to survive under conditions of low oxygen and nutrients, and that lead to resistance to some apoptotic pathways and facilitate invasion and metastasis. Therefore, inhibition of transactivation by HIF has become an attractive target in cancer research. Herein we present the results of a cell-based screening approach that led to the discovery of substituted 1H-pyrazole-3-carboxamides. Chemical optimization of the hit class with respect to potency and metabolic stability is described; it resulted in novel 5-(1H-pyrazol-3-yl)-1,2,4-oxadiazoles that inhibit the hypoxia-induced accumulation of HIF-1α and HIF-2α. The HIF inhibitory potency in the screening cell system was improved from IC₅₀ 190 to 0.7 nM, and significant parts of the SAR are disclosed. For a key compound, the ability to suppress the hypoxia-induced expression of HIF target genes was studied in A549 human lung adenocarcinoma cells. The same compound shows a favorable pharmacokinetic profile in rats after i.v. and p.o. administration.
Insights
Researchers discovered novel compounds that inhibit hypoxia-inducible factors (HIF-1 and HIF-2), crucial for tumor survival and metastasis. These potent inhibitors show promise for cancer therapy by blocking HIF activity and gene expression.
Area of Science:
- Oncology
- Molecular Biology
- Medicinal Chemistry
Background:
- Hypoxia-inducible factors (HIF-1 and HIF-2) are key regulators of tumor cell survival, invasion, and metastasis under low oxygen conditions.
- HIFs also contribute to resistance against apoptosis, making them attractive therapeutic targets in cancer research.
Purpose of the Study:
- To identify and optimize novel small molecules that inhibit the transactivation activity of HIF-1 and HIF-2.
- To develop potent HIF inhibitors with improved metabolic stability and favorable pharmacokinetic profiles for potential cancer treatment.
Main Methods:
- A cell-based screening approach was employed to discover initial hit compounds.
- Chemical optimization of lead compounds, focusing on substituted 1H-pyrazole-3-carboxamides, was performed.
- Potency was assessed by measuring the inhibition of hypoxia-induced HIF-1α and HIF-2α accumulation (IC₅₀ values).
- Inhibition of HIF target gene expression was evaluated in A549 human lung adenocarcinoma cells.
- Pharmacokinetic studies were conducted in rats following intravenous (i.v.) and oral (p.o.) administration.
Main Results:
- A cell-based screen identified substituted 1H-pyrazole-3-carboxamides as inhibitors of HIF.
- Chemical optimization led to novel 5-(1H-pyrazol-3-yl)-1,2,4-oxadiazoles with significantly improved HIF inhibitory potency (IC₅₀ from 190 nM to 0.7 nM).
- A key compound demonstrated suppression of hypoxia-induced HIF target gene expression in A549 cells and exhibited favorable pharmacokinetics in rats.
Conclusions:
- Novel 5-(1H-pyrazol-3-yl)-1,2,4-oxadiazoles effectively inhibit HIF-1 and HIF-2 accumulation and activity.
- These compounds represent promising drug candidates for cancer therapy targeting the HIF pathway.
- The optimized compounds possess potent activity, good metabolic stability, and favorable pharmacokinetic properties.
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