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Expression and functional validation of Bombyx mori nucleopolyhedrovirus ORF29, a conserved Nudix motif protein
Abstract:
Our previous study showed that Bombyx mori nucleopolyhedrovirus (BmNPV) orf29 encodes a 26 kDa protein expressed in the early stage of infection cycle. BmNPV ORF29, contains a conserved motif of Nudix (nucleotide diphosphate X) superfamily. It has the highest homology with ADP-ribose pyrophosphatase (ADPRase), a subfamily of Nudix pyrophosphatase. In this work, we purified the recombinant BmNPV ORF29 in Escherichia coli by metal chelating affinity chromatography. The amino acid sequence of recombinant protein was confirmed by mass spectroscopic analysis and found that the purified protein could be able to catalyze the breakdown of ADP-ribose to AMP and ribose 5-phosphate, with Km and Kcat values of 182 μmol/l and 5.3 s-1 respectively. The optimal activity was at alkaline pH (8.5) with Mg2+ (0.5-mmol/l) ions as the cofactor.
Insights
The Bombyx mori nucleopolyhedrovirus (BmNPV) ORF29 protein functions as an ADP-ribose pyrophosphatase (ADPRase). This enzyme breaks down ADP-ribose, aiding in understanding viral infection mechanisms.
Area of Science:
- Molecular Biology
- Virology
- Enzymology
Background:
- The Bombyx mori nucleopolyhedrovirus (BmNPV) orf29 gene encodes an early-stage viral protein.
- BmNPV ORF29 shares homology with the Nudix superfamily, specifically ADP-ribose pyrophosphatase (ADPRase).
Purpose of the Study:
- To purify and characterize the recombinant BmNPV ORF29 protein.
- To investigate the enzymatic activity and properties of BmNPV ORF29.
Main Methods:
- Recombinant protein purification using metal chelating affinity chromatography in E. coli.
- Mass spectroscopic analysis for amino acid sequence confirmation.
- Enzymatic assays to determine kinetic parameters (Km, Kcat) and optimal activity conditions.
Main Results:
- The purified BmNPV ORF29 protein was successfully obtained and verified.
- The enzyme catalyzes the breakdown of ADP-ribose into AMP and ribose 5-phosphate.
- Kinetic parameters were determined: Km = 182 μmol/l and Kcat = 5.3 s-1.
- Optimal enzyme activity was observed at alkaline pH (8.5) with Mg2+ as a cofactor.
Conclusions:
- BmNPV ORF29 is an active ADP-ribose pyrophosphatase.
- Understanding this enzyme's function provides insights into BmNPV replication and pathogenesis.
- This characterization lays the groundwork for further studies on viral nucleotide metabolism.
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