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Updated: May 5, 2026

Characterize Disease-related Mutants of RAF Family Kinases by Using a Set of Practical and Feasible Methods
Published on: July 17, 2019
Clinicopathological features of nonsmall cell lung carcinomas with BRAF mutations
T Kinno1, K Tsuta, K Shiraishi
1Division of Pathology and Clinical Laboratories, National Cancer Center Hospital.
Background:
Recently, driver tyrosine kinase gene mutations have been detected in malignant tumors, including lung tumors. Notwithstanding their attractiveness as targets for molecular therapy, limited information is available regarding BRAF-mutated lung carcinomas.
Materials And Methods:
BRAF mutation status was determined in 2001 surgically resected nonsmall-cell lung cancer (NSCLC) cases using high-resolution melting analysis (HRMA) followed by Sanger sequencing and/or deep sequencing using next generation sequencer.
Results:
BRAF mutations were detected in 26 (1.3%) of 2001 NSCLC cases (25 adenocarcinomas and 1 squamous cell carcinoma). In the 26 cases, 13 mutation genotypes were identified, including V600E (8 of 26; 30.8%), G469A (6 of 26; 23.1%), K601E (4 of 26; 15.4%), and other residual mutations (1 of 26; 0.04%). Of the 13 genotypes, 4 genotypes (G464E, G596R, A598T, and G606R) had not been previously reported in lung cancer. The overall survival rate was not significantly different between patients with wild-type BRAF and those with V600E or non-V600E BRAF mutations (P = 0.49 and P = 0.15, respectively). Histomorphological analysis revealed that focal clear cell changes were present in 75% of V600E-mutated tumors. All V600E BRAF-mutated tumors were negative for other driver gene alterations including epidermal growth factor receptor (EGFR) and KRAS mutations and the anaplastic lymphoma kinase gene translocation, whereas five tumors with non-V600E BRAF mutations (four G469A and one G464E/G466R) showed concomitant EGFR mutations.
Conclusion:
The frequency of BRAF mutations in lung cancer was low in an Asian cohort. Furthermore, BRAF mutation status lacked prognostic significance in this patient population.
Insights
BRAF mutations are rare in lung cancer, occurring in 1.3% of cases. BRAF mutation status does not impact patient survival, but V600E mutations show distinct tumor characteristics.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Driver tyrosine kinase gene mutations are increasingly identified in lung cancers.
- BRAF mutations represent potential therapeutic targets, yet data on BRAF-mutated lung carcinomas remain limited.
Purpose of the Study:
- To investigate the frequency and characteristics of BRAF mutations in a large cohort of non-small cell lung cancer (NSCLC) patients.
- To determine the prognostic significance of BRAF mutations in lung cancer.
- To explore the association between BRAF mutations and clinicopathological features.
Main Methods:
- BRAF mutation status was assessed in 2001 surgically resected NSCLC cases.
- High-resolution melting analysis (HRMA) was employed, followed by Sanger sequencing and/or next-generation deep sequencing.
- Histomorphological analysis was performed on BRAF-mutated tumors.
Main Results:
- BRAF mutations were identified in 1.3% (26/2001) of NSCLC cases, predominantly adenocarcinomas.
- Thirteen distinct BRAF genotypes were found, including four novel mutations not previously reported in lung cancer.
- No significant difference in overall survival was observed between patients with wild-type BRAF and those with V600E or non-V600E BRAF mutations.
- Focal clear cell changes were noted in 75% of V600E-mutated tumors.
- V600E mutations were mutually exclusive with EGFR, KRAS, and ALK alterations, while some non-V600E mutations co-occurred with EGFR mutations.
Conclusions:
- BRAF mutations are infrequent in lung cancer within an Asian population.
- BRAF mutation status does not appear to hold prognostic value for lung cancer patients in this cohort.
- Specific BRAF mutations, like V600E, may be associated with distinct histopathological features and co-alteration patterns.
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10:16Employing Digital Droplet PCR to Detect BRAF V600E Mutations in Formalin-fixed Paraffin-embedded Reference Standard Cell Lines
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