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Updated: May 5, 2026

Preparation of a Blood Culture Pellet for Rapid Bacterial Identification and Antibiotic Susceptibility Testing
Published on: October 15, 2014
Blood cultures in sick children
Harsha Lochan1, Colleen Bamford, Brian Eley
1Paediatric Infectious Diseases Unit, Red Cross War Memorial Children's Hospital, and Department of Paediatrics and Child Health, University of Cape Town, South Africa. harsha.lochan@uct.ac.za.
Insights
Blood culture contamination rates remain high, especially in infants, with coagulase-negative staphylococci (CoNS) as the most common contaminant. Improving sterile collection techniques is crucial for accurate bloodstream infection diagnosis.
Area of Science:
- Pediatric Infectious Diseases
- Clinical Microbiology
- Laboratory Medicine
Background:
- Blood cultures (BCs) are essential for diagnosing bloodstream infections in critically ill children.
- Previous studies, including adult patient audits, have indicated high contamination rates in BCs, often by coagulase-negative staphylococci (CoNS).
- Understanding contamination rates and common pathogens in pediatric populations is vital for appropriate patient management.
Purpose of the Study:
- To determine the rates of blood culture contamination in children at a tertiary-level children's hospital.
- To identify common pathogenic organisms responsible for bloodstream infections in pediatric patients.
- To compare contamination rates between different age groups within the pediatric population.
Main Methods:
- Retrospective analysis of 47,677 blood culture results from children admitted between 2008 and 2012.
- Data extracted from the National Health Laboratory Service database.
- Analysis of pathogenic versus contaminated growth, stratified by age (<1 year vs. >1 year), using Epi Info version 3.5.1.
Main Results:
- Overall contamination proportion ranged from 5.9% to 7.2% annually.
- Coagulase-negative staphylococci (CoNS) accounted for 53.8% of all contaminated BCs.
- Children under 1 year had significantly higher contamination rates (8.7%) compared to older children (4.7%). Pathogenic organisms were found in 6.2% of BCs, with a notable increase in Gram-negative organisms and a decrease in Streptococcus pneumoniae.
Conclusions:
- Blood culture contamination rates in this pediatric cohort were unacceptably high.
- The findings underscore the critical need for strict adherence to sterile techniques during blood culture specimen collection.
- Monitoring trends in bloodstream pathogens, such as the rise in Gram-negative bacteria, is important for antimicrobial stewardship.
Background:
Blood cultures (BCs) are frequently performed in sick children. A recent audit of BCs among adult patients documented high rates of contamination by coagulase-negative staphylococci (CoNS).
Objectives:
To describe BC contamination rates and common pathogenic organisms causing bloodstream infection in children at a tertiary- level children's hospital.
Methods:
BC results for children admitted to Red Cross War Memorial Children's Hospital from 2008 to 2012 were extracted from the National Health Laboratory Service database. Pathogenic and non-pathogenic (contaminated) growth on BCs in children <1 year of age and >1 year of age, were analysed. Data analysis was performed using Epi Info version 3.5.1.
Results:
A total of 47 677 BCs were performed in the 5-year period. The proportion of contaminated specimens ranged between 5.9% and 7.2% per year (p=0.4). CoNS was the predominant isolate in 53.8% of all contaminated BCs. Children <1 year of age experienced higher contamination rates than children >1 year of age (8.7% v. 4.7%; relative risk 1.84; 95% confidence interval (CI) 1.71 - 1.97). Pathogenic organisms were isolated in 6.2% (95% CI 6.0 - 6.4) of all BC specimens. Among Gram-positive organisms, the proportion of Streptococcus pneumoniae isolates declined from 14.3% to 4.7% (p<0.00001), while there was a significant increase in Gram-negative organisms (51.8% - 57.9%; p=0.04) over the 5-year period. Klebsiella pneumoniae, the predominant Enterobacteriaceae isolated, decreased from 45.8% to 31.7% (p=0.004).
Conclusion:
This study identified unacceptably high BC contamination rates, emphasising the importance of collecting BC specimens under sterile conditions.
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