Comparative genomic analysis shows that Streptococcus suis meningitis isolate SC070731 contains a unique 105K genomic

Zongfu Wu1, Weixue Wang1, Min Tang1

  • 1College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China; Key Lab of Animal Bacteriology, Ministry of Agriculture, Nanjing 210095, China; OIE Reference Lab for Swine Streptococcosis, Nanjing 210095, China.

Gene
|December 10, 2013
PubMed

Insights

Streptococcus suis (SS) genome sequencing reveals a unique genomic island in a meningitis-causing strain. This island contains genes potentially enhancing bacterial fitness and virulence, offering new insights into SS pathogenesis.

Area of Science:

  • Microbiology
  • Genomics
  • Veterinary Medicine

Background:

  • Streptococcus suis (SS) is a significant global swine pathogen causing meningitis in pigs and humans.
  • The pathogenic mechanisms underlying SS infections remain incompletely understood.
  • Understanding SS virulence is crucial for both animal and public health.

Purpose of the Study:

  • To provide the complete genome sequence of Streptococcus suis serotype 2 (SS2) strain SC070731, isolated from a pig with meningitis.
  • To identify genetic factors contributing to SS virulence and pathogenesis.
  • To facilitate comparative genomic analysis with other SS2 strains.

Main Methods:

  • Whole-genome sequencing of SS2 strain SC070731.
  • Bioinformatic analysis to predict protein-coding sequences and identify virulence-associated genes.
  • Comparative genomics to detect unique genomic regions.
  • Virulence assessment using a zebrafish infection model.

Main Results:

  • The SS2 SC070731 genome is 2,138,568 bp with 1933 predicted protein-coding sequences.
  • A unique 105K genomic island was identified in strain SC070731, absent in other sequenced SS2 strains.
  • This island contains a nisin locus, a prophage, and antibiotic resistance genes, and contributes to bacterial fitness and virulence.

Conclusions:

  • The genome sequence of SS2 SC070731 provides a valuable resource for studying SS pathogenesis.
  • The unique 105K genomic island is a key finding, potentially harboring novel virulence factors.
  • Further research into the identified gene products, including putative new surface proteins, is warranted to elucidate SS pathogenesis.

Related Concept Videos

Bacterial Meningitis I: Introduction01:22

Bacterial Meningitis I: Introduction

Bacterial meningitis is a severe, life-threatening inflammation of the meninges, particularly the pia mater and arachnoid mater, affecting the subarachnoid space, ventricles, and cerebrospinal fluid (CSF). If untreated, it can lead to significant neurological complications or death.Causative AgentsCommon pathogens vary with age and immune status. In adults, major organisms include Streptococcus pneumoniae, Neisseria meningitidis, and Haemophilus influenzae. Streptococcus agalactiae (group B...
15
Modern Molecular Taxonomy01:29

Modern Molecular Taxonomy

Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
836
Bacterial Meningitis II: Pathophysiology01:26

Bacterial Meningitis II: Pathophysiology

Bacterial meningitis typically begins when pathogens such as Neisseria meningitidis and Streptococcus pneumoniae colonize the nasopharynx and invade the bloodstream. This process is facilitated by bacterial virulence factors, such as polysaccharide capsules, which resist phagocytosis and complement-mediated killing. Less commonly, bacteria reach the central nervous system via contiguous spread from infections like otitis media or sinusitis, through congenital or acquired dural defects, or...
24
Other Unique Bacteria01:18

Other Unique Bacteria

Magnetic bacteria exhibit a directed movement called magnetotaxis, driven by structures called magnetosomes. These magnetosomes consist of chains of magnetic particles made of either magnetite (Fe₃O₄) or greigite (Fe₃S₄) and are organized in a linear conformation by a protein scaffold within invaginations of the cell membrane. The bacteria align along the north–south magnetic field lines, much like a compass needle. They are typically microaerophilic or anaerobic...
576
Clinical Significance of Antibiotic Resistance01:25

Clinical Significance of Antibiotic Resistance

Methicillin-resistant Staphylococcus aureus (MRSA) presents a critical public health threat, arising from its capacity to resist β-lactam antibiotics due to acquisition of the mecA gene within the staphylococcal cassette chromosome mec (SCCmec). This gene encodes penicillin-binding protein 2a (PBP2a), which impairs binding efficacy of methicillin and other β-lactams. MRSA has evolved into distinct clonal lineages impacting humans and animals alike, reinforcing its significance within...
90
Evolution of Microbial Genome01:08

Evolution of Microbial Genome

Microbial genome evolution is a highly dynamic process shaped by continual gene gain and loss across species and strains. This genomic flexibility allows microorganisms to adapt rapidly to environmental pressures and interactions with other organisms. Central to understanding this diversity is the distinction between the core and pan genomes.The core genome comprises the genes shared by all sampled strains of a species, representing essential functions needed for fundamental cellular processes.
110