Comparative genomic analysis shows that Streptococcus suis meningitis isolate SC070731 contains a unique 105K genomic
Zongfu Wu1, Weixue Wang1, Min Tang1
1College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, China; Key Lab of Animal Bacteriology, Ministry of Agriculture, Nanjing 210095, China; OIE Reference Lab for Swine Streptococcosis, Nanjing 210095, China.
Abstract:
Streptococcus suis (SS) is an important swine pathogen worldwide that occasionally causes serious infections in humans. SS infection may result in meningitis in pigs and humans. The pathogenic mechanisms of SS are poorly understood. Here, we provide the complete genome sequence of S. suis serotype 2 (SS2) strain SC070731 isolated from a pig with meningitis. The chromosome is 2,138,568bp in length. There are 1933 predicted protein coding sequences and 96.7% (57/59) of the known virulence-associated genes are present in the genome. Strain SC070731 showed similar virulence with SS2 virulent strains HA9801 and ZY05719, but was more virulent than SS2 virulent strain P1/7 in the zebrafish infection model. Comparative genomic analysis revealed a unique 105K genomic island in strain SC070731 that is absent in seven other sequenced SS2 strains. Further analysis of the 105K genomic island indicated that it contained a complete nisin locus similar to the nisin U locus in S. uberis strain 42, a prophage similar to S. oralis phage PH10 and several antibiotic resistance genes. Several proteins in the 105K genomic island, including nisin and RelBE toxin-antitoxin system, contribute to the bacterial fitness and virulence in other pathogenic bacteria. Further investigation of newly identified gene products, including four putative new virulence-associated surface proteins, will improve our understanding of SS pathogenesis.
Insights
Streptococcus suis (SS) genome sequencing reveals a unique genomic island in a meningitis-causing strain. This island contains genes potentially enhancing bacterial fitness and virulence, offering new insights into SS pathogenesis.
Area of Science:
- Microbiology
- Genomics
- Veterinary Medicine
Background:
- Streptococcus suis (SS) is a significant global swine pathogen causing meningitis in pigs and humans.
- The pathogenic mechanisms underlying SS infections remain incompletely understood.
- Understanding SS virulence is crucial for both animal and public health.
Purpose of the Study:
- To provide the complete genome sequence of Streptococcus suis serotype 2 (SS2) strain SC070731, isolated from a pig with meningitis.
- To identify genetic factors contributing to SS virulence and pathogenesis.
- To facilitate comparative genomic analysis with other SS2 strains.
Main Methods:
- Whole-genome sequencing of SS2 strain SC070731.
- Bioinformatic analysis to predict protein-coding sequences and identify virulence-associated genes.
- Comparative genomics to detect unique genomic regions.
- Virulence assessment using a zebrafish infection model.
Main Results:
- The SS2 SC070731 genome is 2,138,568 bp with 1933 predicted protein-coding sequences.
- A unique 105K genomic island was identified in strain SC070731, absent in other sequenced SS2 strains.
- This island contains a nisin locus, a prophage, and antibiotic resistance genes, and contributes to bacterial fitness and virulence.
Conclusions:
- The genome sequence of SS2 SC070731 provides a valuable resource for studying SS pathogenesis.
- The unique 105K genomic island is a key finding, potentially harboring novel virulence factors.
- Further research into the identified gene products, including putative new surface proteins, is warranted to elucidate SS pathogenesis.
More Related Videos
Related Concept Videos
Bacterial Meningitis I: Introduction
Modern Molecular Taxonomy
Bacterial Meningitis II: Pathophysiology
Other Unique Bacteria
Clinical Significance of Antibiotic Resistance
Evolution of Microbial Genome


