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Assaying Protein Kinase Activity with Radiolabeled ATP
Published on: May 26, 2017
Intracellular distribution of differentially phosphorylated dual-specificity tyrosine phosphorylation-regulated
Wojciech Kaczmarski1, Madhabi Barua, Bozena Mazur-Kolecka
1Department of Developmental Neurobiology, NYS Institute for Basic Research in Developmental Disabilities, Staten Island, New York.
Abstract:
The gene encoding dual-specificity tyrosine phosphorylation-regulated kinase 1A (DYRK1A) is located within the Down syndrome (DS) critical region of chromosome 21. DYRK1A interacts with a plethora of substrates in the cytosol, cytoskeleton, and nucleus. Its overexpression is a contributing factor to the developmental alterations and age-associated pathology observed in DS. We hypothesized that the intracellular distribution of DYRK1A and cell-compartment-specific functions are associated with DYRK1A posttranslational modifications. Fractionation showed that, in both human and mouse brain, almost 80% of DYRK1A was associated with the cytoskeleton, and the remaining DYRK1A was present in the cytosolic and nuclear fractions. Coimmunoprecipitation revealed that DYRK1A in the brain cytoskeleton fraction forms complexes with filamentous actin, neurofilaments, and tubulin. Two-dimensional gel analysis of the fractions revealed DYRK1A with distinct isoelectric points: 5.5-6.5 in the nucleus, 7.2-8.2 in the cytoskeleton, and 8.7 in the cytosol. Phosphate-affinity gel electrophoresis demonstrated several bands of DYRK1A with different mobility shifts for nuclear, cytoskeletal, and cytosolic DYRK1A, indicating modification by phosphorylation. Mass spectrometry analysis disclosed one phosphorylated site in the cytosolic DYRK1A and multiple phosphorylated residues in the cytoskeletal DYRK1A, including two not previously described. This study supports the hypothesis that intracellular distribution and compartment-specific functions of DYRK1A may depend on its phosphorylation pattern.
Insights
Dual-specificity tyrosine phosphorylation-regulated kinase 1A (DYRK1A) in Down syndrome (DS) brain is mainly in the cytoskeleton. Its distribution and function depend on its phosphorylation pattern, offering insights into DS pathology.
Area of Science:
- Molecular Biology
- Neuroscience
- Genetics
Background:
- The DYRK1A gene is in the Down syndrome critical region on chromosome 21.
- DYRK1A overexpression contributes to Down syndrome (DS) developmental and pathological features.
- DYRK1A interacts with diverse substrates across cellular compartments.
Purpose of the Study:
- To investigate the association between DYRK1A intracellular distribution, compartment-specific functions, and posttranslational modifications.
- To explore the role of DYRK1A phosphorylation in Down syndrome pathology.
Main Methods:
- Brain tissue fractionation (human and mouse) to isolate cytosolic, nuclear, and cytoskeletal components.
- Coimmunoprecipitation to identify DYRK1A interacting proteins within the cytoskeleton.
- Two-dimensional gel electrophoresis and phosphate-affinity gel electrophoresis to analyze DYRK1A isoelectric points and phosphorylation.
- Mass spectrometry to identify specific phosphorylation sites on DYRK1A.
Main Results:
- Approximately 80% of DYRK1A in the brain is associated with the cytoskeleton, with the remainder in cytosolic and nuclear fractions.
- Cytoskeletal DYRK1A forms complexes with actin, neurofilaments, and tubulin.
- DYRK1A exhibits distinct phosphorylation patterns and isoelectric points across different cellular compartments, indicating compartment-specific modifications.
Conclusions:
- DYRK1A's intracellular distribution is predominantly cytoskeletal in the brain.
- Compartment-specific phosphorylation patterns suggest a regulatory mechanism for DYRK1A function.
- These findings support the hypothesis that DYRK1A's localization and function are modulated by its phosphorylation state, impacting Down syndrome pathogenesis.
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