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A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
Published on: September 20, 2018
vigiGrade: a tool to identify well-documented individual case reports and highlight systematic data quality issues
Tomas Bergvall1, G Niklas Norén, Marie Lindquist
1Uppsala Monitoring Centre, WHO Collaborating Centre for International Drug Monitoring, Uppsala, Sweden, tomas.bergvall@who-umc.org.
A new vigiGrade completeness score helps assess medicine safety reports. While only 13% of reports are well-documented globally, physicians and European countries show higher quality data, with potential seen in consumer reports.
Area of Science:
- Pharmacovigilance and Drug Safety
- Health Informatics
- Data Quality Assessment
Background:
- Individual case safety reports (ICSRs) are crucial for post-marketing drug surveillance.
- The clinical value of ICSRs is directly linked to the completeness of information provided.
- Improving data quality through enhanced communication and standardized metrics is essential.
Purpose of the Study:
- To introduce the vigiGrade completeness score for evaluating ICSR data quality.
- To identify predictors associated with well-documented safety reports on a global scale.
Main Methods:
- Developed the vigiGrade completeness score (C) to quantify clinically relevant information in structured ICSRs.
- Defined 'well-documented' reports as those with a C score > 0.8.
- Analyzed data from the WHO global ICSR database (VigiBase) from 2007 to January 2012.
- Utilized odds ratios to identify subgroups with a high proportion of well-documented reports.
Main Results:
- 13% (430,000) of analyzed reports in VigiBase were classified as well-documented (C > 0.8).
- Well-documented reports predominantly originated from Europe (2/3) and physicians (2/3).
- Italy reported the highest rate (65%) of well-documented reports among countries with over 1,000 reports; several European nations also showed high rates (>30%).
- Physician-submitted reports had a 24% well-documented rate versus 4% for consumers; however, Denmark and Norway showed high consumer report quality.
- Reports in the older INTDIS format (22%) were more complete than E2B format (11%), except for E2B reports via VigiFlow (29%).
Conclusions:
- Globally, only one in eight safety reports meets the desired information completeness standard.
- Significant variations in data quality exist across countries, with some demonstrating much higher proportions of well-documented reports.
- Physicians and e-reporting systems (like VigiFlow) contribute to higher quality reports.
- Consumer reports from specific regions show high quality, indicating future potential.
- The vigiGrade score has successfully identified data quality issues in regions like Italy and the USA.
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