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Scanning Electron Microscopy01:07

Scanning Electron Microscopy

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A scanning electron microscope (SEM) is used to study the surface features of a sample by using an electron beam that scans the sample surface in a two-dimensional manner. Typically, areas between ~1 centimeter to 5 micrometers in width can be imaged. SEM can be used to image bacteria, viruses, tissues as well as larger samples like insects. Conventional SEM gives a magnification ranging from 20X to 30,000X and spatial resolution of 50 to 100 nanometers.
Fundamental Principles
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Overview of Electron Microscopy01:25

Overview of Electron Microscopy

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The wavelengths of visible light ultimately limit the maximum theoretical resolution of images created by light microscopes. Most light microscopes can only magnify 1000X, and a few can magnify up to 1500X. Electrons, like electromagnetic radiation, can behave like waves, but with wavelengths of 0.005 nm, they produce significantly greater resolution up to 0.05 nm as compared to 500 nm for visible light. An electron microscope (EM) can create a sharp image that is magnified up to 2,000,000X.
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Overview of Microscopy Techniques01:22

Overview of Microscopy Techniques

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The early pioneers of microscopy opened a window into the invisible world of microorganisms. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes that leveraged nonvisible light, such as fluorescence microscopy that uses an ultraviolet light source and electron microscopy that uses short-wavelength electron beams. These advances significantly improved magnification, image resolution, and contrast. By comparison, the...
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Electron Microscope Tomography and Single-particle Reconstruction01:07

Electron Microscope Tomography and Single-particle Reconstruction

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Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
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Transmission Electron Microscopy01:15

Transmission Electron Microscopy

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In 1931, physicist Ernst Ruska—building on the idea that magnetic fields can direct an electron beam just as lenses can direct a beam of light in an optical microscope—developed the first prototype of the electron microscope. This development led to the development of the field of electron microscopy. In the transmission electron microscope (TEM), electrons are produced by a hot tungsten element and accelerated by a potential difference in an electron gun, which gives them up to 400...
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X-ray Diffraction of Biological Samples01:10

X-ray Diffraction of Biological Samples

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X-ray diffraction or XRD is an analytical tool that utilizes X-rays to study ordered structures such as crystalline organic and inorganic samples, polycrystalline materials, proteins, carbohydrates, and drugs.
According to Bragg's law, when X-rays strike the sample positioned on a stage, the rays are  scattered by the electron clouds around the sample atoms. The  X-ray diffraction or scattering is caused by constructive interference of the X-ray waves that reflect off the internal...
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Related Experiment Video

Updated: May 4, 2026

Synchrotron X-ray Microdiffraction and Fluorescence Imaging of Mineral and Rock Samples
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Synchrotron X-ray Microdiffraction and Fluorescence Imaging of Mineral and Rock Samples

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X-ray microanalysis in the scanning electron microscope.

Godfried M Roomans1, Anca Dragomir

  • 1School of Health and Medical Sciences, Örebro University, Örebro, Sweden.

Methods in Molecular Biology (Clifton, N.J.)
|December 21, 2013
PubMed
Summary

Scanning electron microscopy with X-ray microanalysis identifies chemical elements in specimens. This technique offers high sensitivity for elemental detection and detailed spatial resolution, crucial for biological sample analysis.

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Area of Science:

  • Materials Science
  • Analytical Chemistry
  • Biophysics

Background:

  • X-ray microanalysis using scanning electron microscopy (SEM) is a powerful technique for elemental determination.
  • It enables the analysis of bulk or semi-thick specimens with high sensitivity.

Purpose of the Study:

  • To detail protocols for X-ray microanalysis of various specimen types.
  • To cover qualitative and quantitative analysis aspects, including limitations.

Main Methods:

  • Specimen preparation for frozen-hydrated and freeze-dried samples.
  • Analysis of small fluid volumes and cell cultures using SEM X-ray microanalysis.

Main Results:

  • Detection limits for elements are in the mmol/kg or parts per million range.
  • Smallest detectable amounts are as low as 10(-18) g.
  • Spatial resolution is dependent on specimen thickness.

Conclusions:

  • X-ray microanalysis is effective for elemental determination in diverse samples.
  • Careful protocols are necessary for biological specimens to prevent ion loss.
  • The technique provides valuable insights into elemental composition with defined limitations.