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Updated: May 4, 2026

Quantitative Methods to Study Protein Arginine Methyltransferase 1-9 Activity in Cells
Published on: August 7, 2021
Using unnatural amino acid mutagenesis to probe the regulation of PRMT1
Heather L Rust1, Venkataraman Subramanian, Graham M West
1Departments of †Chemistry, ‡Mass Spectrometry and Proteomics, and §Molecular Therapeutics, The Scripps Research Institute , 130 Scripps Way, Jupiter, Florida 33458, United States.
Abstract:
Protein arginine methyltransferase 1 (PRMT1)-dependent methylation contributes to the onset and progression of numerous diseases (e.g., cancer, heart disease, ALS); however, the regulatory mechanisms that control PRMT1 activity are relatively unexplored. We therefore set out to decipher how phosphorylation regulates PRMT1 activity. Curated mass spectrometry data identified Tyr291, a residue adjacent to the conserved THW loop, as being phosphorylated. Natural and unnatural amino acid mutagenesis, including the incorporation of p-carboxymethyl-l-phenylalanine (pCmF) as a phosphotyrosine mimic, were used to show that Tyr291 phosphorylation alters the substrate specificity of PRMT1. Additionally, p-benzoyl-l-phenylalanine (pBpF) was incorporated at the Tyr291 position, and cross-linking experiments with K562 cell extracts identified several proteins (e.g., hnRNPA1 and hnRNP H3) that bind specifically to this site. Moreover, we also demonstrate that Tyr291 phosphorylation impairs PRMT1's ability to bind and methylate both proteins. In total, these studies demonstrate that Tyr291 phosphorylation alters both PRMT1 substrate specificity and protein-protein interactions.
Insights
Phosphorylation of Tyr291 regulates Protein Arginine Methyltransferase 1 (PRMT1) activity. This modification alters PRMT1
Area of Science:
- Biochemistry
- Molecular Biology
- Enzymology
Background:
- Protein arginine methyltransferase 1 (PRMT1) is implicated in various diseases, including cancer and ALS.
- Regulatory mechanisms controlling PRMT1 activity are not well understood.
- Phosphorylation is a key post-translational modification that regulates protein function.
Purpose of the Study:
- To investigate the role of phosphorylation in regulating PRMT1 activity.
- To identify specific phosphorylation sites on PRMT1.
- To elucidate how phosphorylation affects PRMT1's substrate specificity and interactions.
Main Methods:
- Mass spectrometry to identify phosphorylated residues.
- Site-directed mutagenesis using natural and unnatural amino acids (e.g., pCmF, pBpF) to mimic phosphorylation.
- Cross-linking experiments with cell extracts to identify binding partners.
- In vitro assays to assess PRMT1 activity and binding.
Main Results:
- Tyrosine 291 (Tyr291), adjacent to the THW loop, was identified as a phosphorylation site.
- Phosphorylation at Tyr291 alters PRMT1's substrate specificity.
- Incorporation of phosphotyrosine mimics (pCmF, pBpF) confirmed the functional impact of Tyr291 phosphorylation.
- Cross-linking identified hnRNPA1 and hnRNP H3 as specific binding partners to the phosphorylated Tyr291 site.
- Tyr291 phosphorylation impairs PRMT1's ability to bind and methylate its protein substrates.
Conclusions:
- Tyr291 phosphorylation is a critical regulatory mechanism for PRMT1.
- This modification impacts both PRMT1's enzymatic activity and its protein-protein interaction profile.
- Understanding Tyr291 phosphorylation provides insights into PRMT1's role in disease pathogenesis and offers potential therapeutic targets.
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