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Bayesian Model Selection in High-Dimensional Settings.

Valen E Johnson1, David Rossell2

  • 1Ad interim Division Head of Quantitative Sciences and Professor of Biostatistics at M.D. Anderson Cancer Center, Houston, TX 77030.

Journal of the American Statistical Association
|December 24, 2013
PubMed
Summary
This summary is machine-generated.

This study introduces a novel Bayesian model selection method using nonlocal priors, enhancing accuracy and consistency in linear models. The new approach rivals penalized likelihood methods, offering reliable model identification and probability estimation.

Keywords:
Adaptive LASSODantzig selectorElastic netIntrinsic Bayes factorIntrinsic priorNonlocal priorNonnegative garroteOracleg-prior

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Area of Science:

  • Statistics
  • Computational Statistics
  • Bayesian Inference

Background:

  • Standard Bayesian model selection methods often underperform compared to penalized likelihood approaches.
  • Existing methods lack consistency guarantees, especially when the number of covariates is large relative to observations.

Purpose of the Study:

  • To develop a modified Bayesian model selection procedure that is competitive with penalized likelihood methods.
  • To establish theoretical consistency properties for the proposed method in linear models.
  • To provide accurate posterior probability estimates for selected models.

Main Methods:

  • Modification of standard Bayesian model selection by incorporating nonlocal prior densities on model parameters.
  • Theoretical analysis of consistency properties under the condition that the number of covariates (p) is bounded by the number of observations (n).
  • Simulation studies to compare performance against established penalized likelihood methods.

Main Results:

  • The proposed nonlocal prior Bayesian model selection procedures demonstrate consistency in linear models.
  • These procedures achieve accurate estimation of the posterior model probabilities.
  • Simulation results indicate performance comparable to or exceeding penalized likelihood methods across various settings.

Conclusions:

  • The novel Bayesian approach with nonlocal priors offers a consistent and accurate alternative for model selection in linear models.
  • This method extends consistency properties to settings where p <= n, a significant theoretical advancement.
  • The proposed procedures provide a robust framework for both model identification and probability assessment.