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CENTER-ADJUSTED INFERENCE FOR A NONPARAMETRIC BAYESIAN RANDOM EFFECT DISTRIBUTION.

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  • 1Department of Biostatistics, University of Texas M.D. Anderson Cancer Center, Houston, TX 77030, USA.

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Summary
This summary is machine-generated.

Dirichlet process (DP) priors in Bayesian models pose identifiability issues for fixed effects and variance components. This study introduces a post-processing adjustment for DP moments, improving inference with no added computational cost.

Keywords:
Bayesian nonparametric modelDirichlet processfixed effectsgeneralized linear mixed modelpost-processingrandom momentsrandom probability measure

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Area of Science:

  • Statistics
  • Biostatistics
  • Computational Statistics

Background:

  • Dirichlet process (DP) priors are widely used in semiparametric Bayesian random effect models.
  • DP priors present identifiability challenges for fixed effects and variance components due to a non-zero mean assumption.
  • This complicates interpretation and inference in mixed-effects models.

Purpose of the Study:

  • To propose an adjusted inference method for semiparametric Bayesian models using Dirichlet process priors.
  • To address the identifiability problems associated with DP priors in mixed-effects models.
  • To provide a computationally efficient adjustment technique.

Main Methods:

  • Developed a post-processing technique based on analytic evaluation of DP moments.
  • Integrated the moment adjustment into Markov chain Monte Carlo (MCMC) simulations.
  • Validated the method through simulation studies in linear and logistic mixed-effects models.
  • Applied the method to a prostate-specific antigen dataset.

Main Results:

  • The proposed adjustment method effectively resolves identifiability issues in DP-mixed models.
  • The adjustment can be seamlessly incorporated into MCMC simulations with minimal computational overhead.
  • Simulation studies demonstrated the procedure's good performance in both linear and logistic models.
  • An R function is provided for practical implementation.

Conclusions:

  • The post-processing adjustment offers a practical solution for inference challenges with DP priors in Bayesian models.
  • This method enhances the interpretability and reliability of fixed effects and variance components.
  • The approach is computationally efficient and readily applicable in statistical software.