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Updated: May 4, 2026

Population and Single-Cell Analysis of Antibiotic Persistence in Escherichia coli
Published on: March 24, 2023
MazF-induced growth inhibition and persister generation in Escherichia coli
Arti Tripathi1, Pooja C Dewan, Shahbaz Ahmed
1From the Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India and.
Abstract:
Toxin-antitoxin systems are ubiquitous in nature and present on the chromosomes of both bacteria and archaea. MazEF is a type II toxin-antitoxin system present on the chromosome of Escherichia coli and other bacteria. Whether MazEF is involved in programmed cell death or reversible growth inhibition and bacterial persistence is a matter of debate. In the present work the role of MazF in bacterial physiology was studied by using an inactive, active-site mutant of MazF, E24A, to activate WT MazF expression from its own promoter. The ectopic expression of E24A MazF in a strain containing WT mazEF resulted in reversible growth arrest. Normal growth resumed on inhibiting the expression of E24A MazF. MazF-mediated growth arrest resulted in an increase in survival of bacterial cells during antibiotic stress. This was studied by activation of mazEF either by overexpression of an inactive, active-site mutant or pre-exposure to a sublethal dose of antibiotic. The MazF-mediated persistence phenotype was found to be independent of RecA and dependent on the presence of the ClpP and Lon proteases. This study confirms the role of MazEF in reversible growth inhibition and persistence.
Insights
MazEF toxin-antitoxin systems induce reversible bacterial growth arrest, enhancing survival during antibiotic stress. This persistence mechanism depends on ClpP and Lon proteases, not RecA.
Area of Science:
- Microbiology
- Bacterial Physiology
- Molecular Biology
Background:
- Toxin-antitoxin systems are widespread in bacteria and archaea.
- MazEF is a type II system in Escherichia coli, with debated roles in cell death, growth inhibition, and persistence.
- Understanding MazF's function is crucial for bacterial survival mechanisms.
Purpose of the Study:
- To investigate the role of MazF in bacterial physiology.
- To determine MazF's involvement in reversible growth inhibition and antibiotic persistence.
- To elucidate the molecular mechanisms underlying MazF-mediated persistence.
Main Methods:
- Utilized an inactive active-site mutant (E24A) of MazF to activate wild-type (WT) MazF expression.
- Ectopic expression of E24A MazF in a WT mazEF strain induced reversible growth arrest.
- Assessed bacterial survival under antibiotic stress following MazF activation.
Main Results:
- Ectopic expression of E24A MazF led to reversible growth arrest, with normal growth resuming upon inhibition.
- MazF-mediated growth arrest increased bacterial survival during antibiotic stress.
- The persistence phenotype was independent of RecA but dependent on ClpP and Lon proteases.
Conclusions:
- MazEF plays a significant role in reversible growth inhibition.
- MazEF contributes to bacterial persistence, a survival strategy against antibiotic stress.
- The study confirms the involvement of ClpP and Lon proteases in MazF-mediated persistence.
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