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Updated: May 4, 2026

Functional Characterization of Endogenously Expressed Human RYR1 Variants
Published on: June 9, 2021
Exon 3 deletion of RYR2 encoding cardiac ryanodine receptor is associated with left ventricular non-compaction
Seiko Ohno1, Masato Omura2, Mihoko Kawamura1
1Department of Cardiovascular and Respiratory Medicine, Shiga University of Medical Science, Seta-Tsukinowa-cho, Otsu, Shiga 520-2192, Japan.
Aims:
Ryanodine receptor gene (RYR2) mutations are well known to cause catecholaminergic polymorphic ventricular tachycardia (CPVT). Recently, RYR2 exon 3 deletion has been identified in patients with dilated cardiomyopathy (DCM) and/or CPVT. This study aimed to screen for the RYR2 exon 3 deletion in CPVT probands, characterize its clinical pathology, and confirm the genomic rearrangement.
Methods And Results:
Our cohort consisted of 24 CPVT probands. Polymerase chain reaction (PCR)-based conventional genetic analysis did not identify any mutations in coding exons of RYR2 in these probands. They were screened using multiplex ligation-dependent probe amplification (MLPA). In probands identified with RYR2 exon 3 deletion, the precise location of the deletion was identified by quantitative PCR and direct sequencing methods. We identified two CPVT probands from unrelated families who harboured a large deletion including exon 3. The probands were 9- and 17-year-old girls. Both probands had a history of syncope related to emotional stress or exercise, exhibited bradycardia, and were diagnosed with left ventricular non-compaction (LVNC). We examined 10 family members and identified six more RYR2 exon 3 deletion carriers. In total, there were eight carriers, of which seven were diagnosed with LVNC (87.5%). Two carriers under the age of 4 years remained asymptomatic, although they were diagnosed with LVNC. Using quantitative PCR and direct sequencing, we confirmed that the deletions were 1.1 and 37.7 kb in length.
Conclusion:
RYR2 exon 3 deletion is frequently associated with LVNC. Therefore, detection of the deletion offers a new modality for predicting the prognosis of patients with LVNC with ventricular/atrial arrhythmias, particularly in children.
Insights
RYR2 exon 3 deletion is linked to left ventricular non-compaction (LVNC) and arrhythmias in children. This genetic finding aids in predicting prognosis for affected individuals.
Area of Science:
- Cardiovascular Genetics
- Molecular Cardiology
Background:
- Ryanodine receptor 2 (RYR2) mutations are established causes of catecholaminergic polymorphic ventricular tachycardia (CPVT).
- RYR2 exon 3 deletion has recently emerged as a genetic factor in dilated cardiomyopathy (DCM) and CPVT.
Observation:
- A cohort of 24 CPVT probands was screened; conventional genetic analysis yielded no RYR2 mutations.
- Multiplex ligation-dependent probe amplification (MLPA) identified RYR2 exon 3 deletion in two unrelated CPVT probands.
- These probands, diagnosed with left ventricular non-compaction (LVNC), presented with syncope and bradycardia.
Findings:
- RYR2 exon 3 deletion was confirmed in eight carriers across two families, with seven diagnosed with LVNC (87.5%).
- Deletions varied in size (1.1 kb and 37.7 kb).
- Younger carriers (<4 years) were asymptomatic despite LVNC diagnosis.
Implications:
- RYR2 exon 3 deletion is strongly associated with LVNC.
- Identifying this deletion provides a prognostic tool for LVNC patients with ventricular/atrial arrhythmias, especially in pediatric cases.
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