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T and B Cell Receptor Immune Repertoire Analysis using Next-generation Sequencing
Published on: January 12, 2021
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Mother and child T cell receptor repertoires: deep profiling study
Ekaterina V Putintseva1, Olga V Britanova1, Dmitriy B Staroverov1
1Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Science , Moscow , Russia.
Frontiers in Immunology
|January 9, 2014
Summary
Maternal and child immunity studies reveal T cell receptor (TCR) repertoires. Deep sequencing shows thymic selection shapes TCRs similarly, with minimal inherited influence, and identifies potential maternal T cells persisting in children.
Area of Science:
- Immunology
- Genetics
- Molecular Biology
Background:
- Maternal and child immunity is crucial for pregnancy health and disease.
- Understanding T cell receptor (TCR) repertoires offers insights into immune interactions.
Purpose of the Study:
- To deeply profile T cell receptor (TCR) repertoires in mothers and children.
- To identify distinguishing features of TCR repertoires in related mother-child pairs.
- To investigate the role of thymic selection and potential maternal T cell transfer.
Main Methods:
- High-throughput Illumina HiSeq sequencing for quantitative TCR beta repertoire profiling.
- Analysis of peripheral blood samples from three mothers and their six children.
- Comparative analysis of TCR beta variable segment usage and CDR3 repertoires.
Main Results:
- Accurate identification of millions of TCR beta clonotypes per individual.
- Thymic selection significantly shapes TCR repertoires similarly in related and unrelated individuals.
- Evidence suggests mature T cells transferred across the placenta can persist as microchimeric clones.
Conclusions:
- Inherited differences have a minor effect on initial TCR repertoire output.
- TCR profiling provides tools to identify and study microchimeric T cells.
- This research deepens the understanding of maternal-fetal immune interactions.
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