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Updated: May 4, 2026

Author Spotlight: Advancing the Detection of Low-Frequency Mutations in Cancer Tissues
Published on: August 23, 2024
Recurrent mutations in epigenetic regulators, RHOA and FYN kinase in peripheral T cell lymphomas
Teresa Palomero1, Lucile Couronné2, Hossein Khiabanian3
11] Institute for Cancer Genetics, Columbia University, New York, New York, USA. [2] Department of Pathology, Columbia University Medical Center, New York, New York, USA. [3].
Abstract:
Peripheral T cell lymphomas (PTCLs) are a heterogeneous and poorly understood group of non-Hodgkin lymphomas. Here we combined whole-exome sequencing of 12 tumor-normal DNA pairs, RNA sequencing analysis and targeted deep sequencing to identify new genetic alterations in PTCL transformation. These analyses identified highly recurrent epigenetic factor mutations in TET2, DNMT3A and IDH2 as well as a new highly prevalent RHOA mutation encoding a p.Gly17Val alteration present in 22 of 35 (67%) angioimmunoblastic T cell lymphoma (AITL) samples and in 8 of 44 (18%) PTCL, not otherwise specified (PTCL-NOS) samples. Mechanistically, the RHOA Gly17Val protein interferes with RHOA signaling in biochemical and cellular assays, an effect potentially mediated by the sequestration of activated guanine-exchange factor (GEF) proteins. In addition, we describe new and recurrent, albeit less frequent, genetic defects including mutations in FYN, ATM, B2M and CD58 implicating SRC signaling, impaired DNA damage response and escape from immune surveillance mechanisms in the pathogenesis of PTCL.
Insights
New genetic mutations in TET2, DNMT3A, IDH2, and RHOA were discovered in peripheral T cell lymphomas (PTCLs). These findings advance our understanding of PTCL pathogenesis and potential therapeutic targets.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Peripheral T cell lymphomas (PTCLs) represent a diverse and inadequately understood category of non-Hodgkin lymphomas.
- Understanding the genetic underpinnings of PTCL transformation is crucial for developing effective treatments.
Purpose of the Study:
- To identify novel genetic alterations driving the transformation of PTCLs.
- To elucidate the functional impact of newly discovered mutations in PTCL pathogenesis.
Main Methods:
- Whole-exome sequencing of 12 tumor-normal DNA pairs.
- RNA sequencing analysis.
- Targeted deep sequencing of PTCL samples.
Main Results:
- Recurrent mutations in epigenetic factors TET2, DNMT3A, and IDH2 were identified.
- A prevalent RHOA mutation (p.Gly17Val) was found in 67% of angioimmunoblastic T cell lymphoma (AITL) and 18% of PTCL, not otherwise specified (PTCL-NOS) samples.
- Mutations in FYN, ATM, B2M, and CD58 were also observed, implicating SRC signaling, DNA damage response, and immune surveillance evasion.
Conclusions:
- The study identifies key genetic alterations, including RHOA mutations, in PTCL pathogenesis.
- These findings provide new insights into PTCL biology and suggest potential therapeutic strategies targeting identified pathways.
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