Related Experiment Video
Updated: May 4, 2026

Isolation of mRNAs Associated with Yeast Mitochondria to Study Mechanisms of Localized Translation
Published on: March 14, 2014
mRNA localization to P-bodies in yeast is bi-phasic with many mRNAs captured in a late Bfr1p-dependent wave
Clare E Simpson1, Jennifer Lui, Christopher J Kershaw
1Department of Biochemistry, Downing Site, The University of Cambridge, Cambridge CB2 1QW, UK.
Abstract:
The relocalization of translationally repressed mRNAs to mRNA processing bodies Pbodies is a key consequence of cellular stress across many systems. Pbodies harbor mRNA degradation components and are implicated in mRNA decay, but the relative timing and control of mRNA relocalization to Pbodies is poorly understood. We used the MS2GFP system to follow the movement of specific endogenous mRNAs in live Saccharomyces cerevisiae cells after nutritional stress. It appears that the relocalization of mRNA to Pbodies after stress is biphasic some mRNAs are present early, whereas others are recruited much later concomitant with recruitment of translation initiation factors, such as eIF4E. We also find that Bfr1p is a latephaselocalizing Pbody protein that is important for the delayed entry of certain mRNAS to Pbodies. Therefore, for the mRNAs tested, relocalization to Pbodies varies both in terms of the kinetics and factor requirements. This work highlights a potential new regulatory juncture in gene expression that would facilitate the overall rationalization of protein content required for adaptation to stress.
Insights
Cellular stress causes mRNA to move to processing bodies (Pbodies) in a two-phase process. Specific proteins like Bfr1p influence the timing of mRNA recruitment, revealing new gene regulation insights.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- Messenger RNA (mRNA) relocalization to mRNA processing bodies (Pbodies) is a critical response to cellular stress.
- Pbodies contain mRNA degradation machinery, but the precise timing and regulation of mRNA recruitment remain unclear.
Purpose of the Study:
- To investigate the kinetics and regulatory mechanisms of endogenous mRNA relocalization to Pbodies in Saccharomyces cerevisiae under nutritional stress.
- To identify factors influencing the differential recruitment of mRNAs to Pbodies.
Main Methods:
- Utilized the MS2GFP system for live-cell imaging of specific endogenous mRNA movements.
- Analyzed mRNA localization dynamics in yeast cells subjected to nutritional stress.
Main Results:
- mRNA relocalization to Pbodies occurs in a biphasic manner: some mRNAs are recruited early, while others are recruited later.
- Late-phase recruitment of certain mRNAs coincides with the arrival of translation initiation factors like eIF4E.
- The protein Bfr1p was identified as a late-phase Pbody component crucial for the delayed entry of specific mRNAs.
Conclusions:
- mRNA recruitment to Pbodies exhibits variable kinetics and factor dependencies.
- This differential regulation suggests a novel control point in gene expression for cellular adaptation to stress.
Related Concept Videos
Ribosome Profiling
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
Regulated mRNA Transport
Ribosomes
Ribosome Structure and Assembly
Ribosomes are composed of ribosomal RNA (rRNA) and proteins. In eukaryotes, rRNA is transcribed from genes in the nucleolus—a part of the nucleus that specializes in ribosome...
Ribosomes
Ribosome Structure and Assembly
Ribosomes are composed of ribosomal RNA (rRNA) and proteins. In eukaryotes, rRNA is transcribed from genes in the nucleolus—a part of the nucleus that specializes in ribosome...
Leaky Scanning
Ribosomal RNA Synthesis
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...

