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Updated: May 3, 2026

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Published on: February 14, 2020
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Paramutation and mutation of R (ch) in maize
1Department of Genetics, University of Wisconsin, Madison, Wisconsin, USA.
Summary
The R(ch) gene in maize controls broad anthocyanin pigmentation. It exhibits paramutation in aleurone but not pericarp, and mutation experiments reveal it
Area of Science:
- Plant genetics
- Maize genetics
- Gene regulation
Background:
- The R locus in maize controls anthocyanin pigmentation.
- R(ch) allele exhibits a broad pigmentation pattern affecting aleurone, anthers, silks, and pericarp.
Purpose of the Study:
- To investigate the paramutational and mutational behavior of the R(ch) allele in maize.
- To elucidate the genetic structure and regulatory mechanisms of the R(ch) locus.
Main Methods:
- Paramutation assays to assess R(ch) behavior in aleurone and pericarp.
- Mutation experiments to identify components within the R(ch) locus.
- Analysis of gene interactions with independent genes.
Main Results:
- R(ch) is paramutable in aleurone but not pericarp, showing differential sensitivity to R(st).
- Mutation experiments indicate R(ch) is a compound locus with at least four components: P, Si, Ch, and S.
- Interactions with other genes support the multi-component model of R(ch).
Conclusions:
- The R(ch) locus is a complex genetic unit with distinct components controlling specific pigmentation traits.
- Differential sensitivity of R(ch) components to R(st) suggests intricate regulatory mechanisms.
- Understanding R(ch) structure provides insights into gene regulation and paramutation in plants.
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