Cell-permeable dual inhibitors of protein kinases CK2 and PIM-1: structural features and pharmacological potential

Giorgio Cozza1, Cristina Girardi, Alessandro Ranchio

  • 1Department of Biomedical Sciences, University of Padova, Padua, Italy.

Insights

A new cell-permeable dual inhibitor, TDB, targets protein kinases CK2 and PIM-1 to induce cancer cell apoptosis. TDB demonstrates superior efficacy over existing treatments, highlighting its therapeutic potential.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Cancer Research

Background:

  • Dual inhibitors of protein kinases CK2 and PIM-1 show promise for inducing cancer cell apoptosis.
  • Existing selective CK2/PIM-1 inhibitors lack cell permeability, limiting their therapeutic application.
  • There is a need for cell-permeable dual inhibitors targeting CK2 and PIM-1.

Purpose of the Study:

  • To develop a selective, cell-permeable dual inhibitor of CK2 and PIM-1.
  • To elucidate the structural basis for the potency and selectivity of the novel inhibitor.
  • To evaluate the compound's efficacy in inducing cancer cell apoptosis and its pharmacological potential.

Main Methods:

  • Derivatization of the CK2 inhibitor TBI with a deoxyribose moiety to create TDB.
  • Synthesis and evaluation of TDB analogs to understand structure-activity relationships.
  • X-ray crystallography to determine the 3D structure of the TDB/CK2 complex.
  • Assessment of TDB's cytotoxic effects, apoptosis induction, and kinase inhibition in cancer cells.

Main Results:

  • TDB was generated as a selective, cell-permeable inhibitor of both CK2 and PIM-1.
  • The 3D structure of the TDB/CK2 complex was solved at 1.25 Å resolution, revealing key structural features.
  • TDB effectively induces apoptosis in cancer cells, with efficacy superior to combinations of individual inhibitors or CX4945.
  • Cancer cells exhibit higher susceptibility to TDB than non-cancer cells, even in multi-drug resistant backgrounds.

Conclusions:

  • TDB is a potent and selective cell-permeable dual inhibitor of CK2 and PIM-1.
  • The structural insights gained contribute to understanding kinase inhibition mechanisms.
  • TDB demonstrates significant pharmacological potential as an anti-cancer agent due to its apoptosis-inducing properties and efficacy against resistant cells.

Related Concept Videos

Inhibition of Cdk Activity02:34

Inhibition of Cdk Activity

The orderly progression of the cell cycle depends on the activation of Cdk protein by binding to its cyclin partner. However, the cell cycle must be restricted when undergoing abnormal changes. Most cancers correlate to the deregulated cell cycle, and since Cdks are a central component of the cell cycle, Cdk inhibitors are extensively studied to develop anticancer agents. For instance, cyclin D associates with several Cdks, such as Cdk 4/6, to form an active complex. The cyclin D-Cdk4/6 complex...
4.8K
Inhibition of CDK Activity02:34

Inhibition of CDK Activity

4.3K
Protein Kinases and Phosphatases02:54

Protein Kinases and Phosphatases

Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
12.1K
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a...
5.1K
MAPK Signaling Cascades01:07

MAPK Signaling Cascades

Mitogen-activated protein kinase, or MAPK pathway, activates three sequential kinases to regulate cellular responses such as proliferation, differentiation, survival, and apoptosis. The canonical MAPK pathway starts with a mitogen or growth factor binding to an RTK. The activated RTKs stimulate Ras, which recruits Raf or MAP3 Kinase (MAPKKK), the first kinase of the MAPK signaling cascade. Raf further phosphorylates and activates MEK or MAP2 Kinases (MAPKK), which in turn phosphorylates MAP...
7.3K
Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
4.7K