Activation of p53 transcriptional activity by SMRT: a histone deacetylase 3-independent function of a transcriptional corepressor
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Updated: May 3, 2026

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Anbu Karani Adikesavan1, Sudipan Karmakar, Patricia Pardo
1Molecular and Cellular Biology, Baylor College of Medicine, Houston, Texas, USA.
Abstract:
The silencing mediator of retinoic acid and thyroid hormone receptors (SMRT) is an established histone deacetylase 3 (HDAC3)-dependent transcriptional corepressor. Microarray analyses of MCF-7 cells transfected with control or SMRT small interfering RNA revealed SMRT regulation of genes involved in DNA damage responses, and the levels of the DNA damage marker γH2AX as well as poly(ADP-ribose) polymerase cleavage were elevated in SMRT-depleted cells treated with doxorubicin. A number of these genes are established p53 targets. SMRT knockdown decreased the activity of two p53-dependent reporter genes as well as the expression of p53 target genes, such as CDKN1A (which encodes p21). SMRT bound directly to p53 and was recruited to p53 binding sites within the p21 promoter. Depletion of GPS2 and TBL1, components of the SMRT corepressor complex, but not histone deacetylase 3 (HDAC3) decreased p21-luciferase activity. p53 bound to the SMRT deacetylase activation domain (DAD), which mediates HDAC3 binding and activation, and HDAC3 could attenuate p53 binding to the DAD region of SMRT. Moreover, an HDAC3 binding-deficient SMRT DAD mutant coactivated p53 transcriptional activity. Collectively, these data highlight a biological role for SMRT in mediating DNA damage responses and suggest a model where p53 binding to the DAD limits HDAC3 interaction with this coregulator, thereby facilitating SMRT coactivation of p53-dependent gene expression.
Insights
The silencing mediator of retinoic acid and thyroid hormone receptors (SMRT) plays a key role in DNA damage responses by coactivating p53-dependent gene expression. SMRT
Area of Science:
- Molecular Biology
- Cellular Biology
- Genetics
Background:
- The silencing mediator of retinoic acid and thyroid hormone receptors (SMRT) is a known transcriptional corepressor.
- SMRT functions dependently on histone deacetylase 3 (HDAC3).
Purpose of the Study:
- To investigate the role of SMRT in DNA damage response pathways.
- To elucidate the mechanism by which SMRT influences p53 transcriptional activity.
Main Methods:
- Microarray analysis in MCF-7 cells with SMRT knockdown.
- Measurement of DNA damage markers (γH2AX, PARP cleavage).
- Assays for p53-dependent reporter gene activity and target gene expression (e.g., CDKN1A/p21).
- Co-immunoprecipitation to study protein-protein interactions (SMRT, p53, HDAC3).
Main Results:
- SMRT depletion elevated DNA damage markers and reduced p53 target gene expression.
- SMRT directly binds to p53 and is recruited to the p21 promoter.
- Components of the SMRT complex, but not HDAC3, are required for p21 regulation.
- p53 binding to SMRT's deacetylase activation domain (DAD) interferes with HDAC3 interaction.
- An SMRT DAD mutant deficient in HDAC3 binding coactivated p53 activity.
Conclusions:
- SMRT is crucial for mediating cellular responses to DNA damage.
- SMRT acts as a coactivator for p53, independent of its corepressor function.
- p53 binding to SMRT's DAD region modulates HDAC3 interaction, facilitating SMRT-mediated coactivation of p53 target genes.
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