Related Experiment Video
Updated: May 3, 2026

07:02
An Assay for Quantifying Protein-RNA Binding in Bacteria
Published on: June 12, 2019
5.9K
Of RNA-binding proteins and their targets: interaction determines expression
Genome Biology
|January 29, 2014
Summary
This study integrates messenger RNA (mRNA) and RNA-binding protein interaction predictions with gene expression data. The findings reveal new regulatory mechanisms controlling cell proliferation and differentiation.
Area of Science:
- Molecular Biology
- Genetics
- Bioinformatics
Background:
- RNA-binding proteins (RBPs) play crucial roles in post-transcriptional gene regulation.
- Understanding mRNA-RBP interactions is key to deciphering gene expression control.
Purpose of the Study:
- To investigate novel regulatory paradigms in cell proliferation and differentiation.
- To integrate computational predictions of mRNA-RBP interactions with experimental expression data.
Main Methods:
- Utilized predictive algorithms to identify potential mRNA-RBP interactions.
- Analyzed experimental gene expression profiles.
- Combined computational and experimental data to uncover regulatory networks.
Main Results:
- Identified previously unknown regulatory interactions between specific mRNAs and RBPs.
- These interactions are significantly associated with processes of cell proliferation.
- The identified interactions also play a role in cell differentiation pathways.
Conclusions:
- The integration of predicted mRNA-RBP interactions and expression profiles offers a powerful approach to discover gene regulation mechanisms.
- Novel regulatory paradigms governing cell proliferation and differentiation have been uncovered.
- This study provides a foundation for further research into RBP-mediated gene control.
Related Concept Videos
RNA Polymerase II Accessory Proteins
8.9K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
8.9K
RNA Polymerase II Accessory Proteins
3.0K
3.0K
Regulation of Expression at Multiple Steps
1.4K
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
1.4K
Regulation of Expression Occurs at Multiple Steps
20.2K
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
20.2K
Regulation of Expression Occurs at Multiple Steps
3.1K
3.1K
Types of RNA
61.3K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
61.3K

