Genetic analysis of a type IV pili-like locus in the archaeon Methanococcus maripaludis
Divya B Nair1, Kaoru Uchida, Shin-Ichi Aizawa
1Department of Biomedical and Molecular Sciences, Queen's University, Kingston, ON, K7L 3N6, Canada.
Abstract:
Methanococcus maripaludis is a stringently anaerobic archaeon with two studied surface structures, archaella and type IV pili. Previously, it was shown that three pilin genes (mmp0233 [epdA], mmp0236 [epdB] and mmp0237 [epdC]) located within an 11 gene cluster in the genome were necessary for normal piliation. This study focused on analysis of the remaining genes to determine their potential involvement in piliation. Reverse transcriptase PCR experiments demonstrated the 11 genes formed a single transcriptional unit. Deletions were made in all the non-pilin genes except mmp0231. Electron microscopy revealed that all the genes in the locus except mmp0235 and mmp0238 were essential for piliation. Complementation with a plasmid-borne wild-type copy of the deleted gene restored at least some piliation. We identified genes for an assembly ATPase and two versions of the conserved pilin platform forming protein necessary for pili assembly at a separate genetic locus.
Insights
Researchers investigated genes in Methanococcus maripaludis, finding most are essential for forming archaella and type IV pili. This archaeon
Area of Science:
- Microbiology
- Archaea research
- Molecular biology
Background:
- Methanococcus maripaludis is an anaerobic archaeon.
- It possesses surface structures like archaella and type IV pili.
- Previous studies identified three essential pilin genes (epdA, epdB, epdC) for piliation.
Purpose of the Study:
- To investigate the role of remaining genes in the 11-gene cluster for M. maripaludis piliation.
- To identify novel genes involved in archaeal surface structure assembly.
Main Methods:
- Reverse transcriptase PCR to analyze gene transcription.
- Gene deletions to assess functional necessity.
- Electron microscopy to visualize pili.
- Plasmid-based complementation for functional rescue.
Main Results:
- The 11 genes in the cluster form a single transcriptional unit.
- All genes except mmp0235 and mmp0238 are essential for piliation.
- Complementation restored partial piliation.
- Genes for an assembly ATPase and pilin platform proteins were identified at a separate locus.
Conclusions:
- Multiple genes within the identified cluster are crucial for M. maripaludis piliation.
- Novel genes involved in pili assembly, including an ATPase, have been characterized.
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