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Updated: May 3, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
All-trans-retinoic acid antagonizes the Hedgehog pathway by inducing patched
Alexander M Busch1, Fabrizio Galimberti1, Kristen E Nehls2
1Department of Pharmacology and Toxicology; Geisel School of Medicine at Dartmouth; Hanover, NH USA.
Abstract:
Male germ cell tumors (GCTs) are a model for a curable solid tumor. GCTs can differentiate into mature teratomas. Embryonal carcinomas (ECs) represent the stem cell compartment of GCTs and are the malignant counterpart to embryonic stem (ES) cells. GCTs and EC cells are useful to investigate differentiation therapy and chemotherapy response. This study explored mechanistic interactions between all-trans-retinoic acid (RA), which induces differentiation of EC and ES cells, and the Hedgehog (Hh) pathway, a regulator of self-renewal and proliferation. RA was found to induce mRNA and protein expression of Patched 1 (Ptch1), the Hh ligand receptor and negative regulator of this pathway. PTCH1 is also a target gene of Hh signaling through Smoothened (Smo) activation. Yet, this observed RA-mediated Ptch1 induction was independent of Smo. It occurred despite co-treatment with RA and Smo inhibitors. Retinoid induction of Ptch1 also occurred in other RA-responsive cancer cell lines and in normal ES cells. Notably, this enhanced Ptch1 expression was preceded by induction of the homeobox transcription factor Meis1, a direct RA target. Direct interaction between Meis1 and Ptch1 was confirmed using chromatin immunoprecipitation assays. To establish the translational relevance of this work, Ptch1 expression was shown to be deregulated in human ECs relative to mature teratoma and the normal seminiferous tubule. Taken together, these findings reveal a previously unrecognized mechanism through which RA can inhibit the Hh pathway via Ptch1 induction. Engaging this pathway is a new way to repress the Hh pathway that can be translated into the cancer clinic.
Insights
All-trans-retinoic acid (RA) inhibits the Hedgehog (Hh) pathway in male germ cell tumors by inducing Patched 1 (Ptch1) expression. This novel mechanism, mediated by Meis1, offers a new therapeutic strategy for cancer treatment.
Area of Science:
- Cancer Biology
- Developmental Biology
- Molecular Oncology
Background:
- Male germ cell tumors (GCTs) are highly curable and serve as a model for differentiation therapy.
- Embryonal carcinomas (ECs) represent the stem cell population within GCTs, analogous to embryonic stem (ES) cells.
- The Hedgehog (Hh) pathway regulates self-renewal and proliferation, making it a target for cancer therapies.
Purpose of the Study:
- To investigate the interaction between all-trans-retinoic acid (RA) and the Hh pathway in GCTs.
- To elucidate the mechanism by which RA influences Hh pathway components.
- To explore the translational relevance of these findings for cancer treatment.
Main Methods:
- Treatment of EC and ES cells with RA and Hh pathway inhibitors.
- Analysis of Patched 1 (Ptch1) mRNA and protein expression.
- Chromatin immunoprecipitation assays to assess Meis1 and Ptch1 interaction.
- Examination of Ptch1 expression in human GCTs.
Main Results:
- RA treatment induced mRNA and protein expression of Ptch1, a negative regulator of the Hh pathway.
- RA-mediated Ptch1 induction was independent of Smoothened (Smo) activation.
- Ptch1 induction by RA was preceded by Meis1 upregulation, with direct interaction confirmed.
- Ptch1 expression was deregulated in human ECs compared to mature teratomas and normal tissues.
Conclusions:
- RA inhibits the Hh pathway in GCTs through a novel mechanism involving Ptch1 induction.
- Meis1 acts as a key mediator in the RA-induced Ptch1 expression.
- This pathway modulation represents a potential new therapeutic strategy for GCTs and other cancers.
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