An mTERF domain protein functions in group II intron splicing in maize chloroplasts

Kamel Hammani1, Alice Barkan

  • 1Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.

Nucleic Acids Research
|February 7, 2014
PubMed

Insights

Maize mitochondrial transcription termination factor 4 (Zm-mTERF4) promotes chloroplast group II intron splicing. Loss of Zm-mTERF4 disrupts splicing of essential RNAs, impacting plastid ribosome biogenesis and plant development.

Area of Science:

  • Plant molecular biology
  • Chloroplast gene expression
  • RNA splicing mechanisms

Background:

  • Mitochondrial transcription termination factor (mTERF) proteins are nucleic acid binders involved in gene expression.
  • While mTERF functions are known in metazoans, their roles in plants, particularly in chloroplasts, remain largely uncharacterized.
  • Plant mTERF proteins are numerous and target either mitochondria or chloroplasts, suggesting diverse roles.

Purpose of the Study:

  • To investigate the molecular function of the maize mTERF protein, Zm-mTERF4, in chloroplasts.
  • To determine if Zm-mTERF4 plays a role in RNA processing events within the chloroplast.
  • To link the function of Zm-mTERF4 to observed plant developmental phenotypes.

Main Methods:

  • Co-immunoprecipitation assays to identify Zm-mTERF4 interacting partners.
  • Analysis of chloroplast intron splicing in wild-type and Zm-mterf4 mutant maize lines.
  • Characterization of Zm-mTERF4 protein complexes using size-exclusion chromatography.
  • Phenotypic analysis of Zm-mterf4 mutants, focusing on plastid ribosome content.

Main Results:

  • Zm-mTERF4 was shown to promote the splicing of group II introns in chloroplasts.
  • Splicing of specific chloroplast introns, including trnI-GAU, trnA-UGC, and rpl2, was impaired in Zm-mterf4 mutants.
  • Zm-mTERF4 interacts with chloroplast introns and forms high molecular weight complexes with known splicing factors.
  • Mutations in Zm-mTERF4 led to a loss of plastid ribosomes, correlating with splicing defects.

Conclusions:

  • Zm-mTERF4 functions as a chloroplast RNA splicing factor, specifically promoting group II intron splicing.
  • The findings expand the known functions of the mTERF protein family to include chloroplast RNA splicing.
  • The conserved role of Zm-mTERF4 orthologs in chloroplast RNA splicing likely explains physiological defects observed in related plant mutants.

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