Structural basis for PI(4)P-specific membrane recruitment of the Legionella pneumophila effector DrrA/SidM
Claudia M Del Campo1, Ashwini K Mishra1, Yu-Hsiu Wang2
1Program in Molecular Medicine and Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Abstract:
Recruitment of the Legionella pneumophila effector DrrA to the Legionella-containing vacuole, where it activates and AMPylates Rab1, is mediated by a P4M domain that binds phosphatidylinositol 4-phosphate [PI(4)P] with high affinity and specificity. Despite the importance of PI(4)P in Golgi trafficking and its manipulation by pathogens, the structural bases for PI(4)P-dependent membrane recruitment remain poorly defined. Here, we determined the crystal structure of a DrrA fragment including the P4M domain in complex with dibutyl PI(4)P and investigated the determinants of phosphoinositide recognition and membrane targeting. Headgroup recognition involves an elaborate network of direct and water-mediated interactions with basic and polar residues in the context of a deep, constrictive binding pocket. An adjacent hydrophobic helical element packs against the acyl chains and inserts robustly into PI(4)P-containing monolayers. The structural, biochemical, and biophysical data reported here support a detailed structural mechanism for PI(4)P-dependent membrane targeting by DrrA.
Insights
The Legionella pneumophila effector DrrA uses its P4M domain to specifically bind phosphatidylinositol 4-phosphate (PI(4)P). This interaction is crucial for recruiting DrrA to the vacuole membrane, enabling pathogen virulence.
Area of Science:
- Microbiology
- Structural Biology
- Cell Biology
Background:
- Phosphatidylinositol 4-phosphate (PI(4)P) is vital for Golgi trafficking.
- Pathogens like Legionella pneumophila manipulate host cell membranes.
- The structural basis for PI(4)P-dependent membrane recruitment by effectors is poorly understood.
Purpose of the Study:
- To elucidate the structural mechanism of DrrA's P4M domain binding to PI(4)P.
- To investigate the molecular determinants of phosphoinositide recognition and membrane targeting by DrrA.
Main Methods:
- X-ray crystallography to determine the structure of the DrrA P4M domain in complex with PI(4)P.
- Biochemical and biophysical assays to analyze phosphoinositide binding and membrane association.
Main Results:
- The crystal structure reveals a deep binding pocket for the PI(4)P headgroup, involving specific polar and basic residues.
- An adjacent hydrophobic helical element interacts with PI(4)P acyl chains and promotes membrane insertion.
- DrrA exhibits high-affinity and specific binding to PI(4)P, driving membrane recruitment.
Conclusions:
- A detailed structural mechanism for PI(4)P-dependent membrane targeting by DrrA has been established.
- Understanding this interaction provides insights into pathogen manipulation of host membranes.
- This work clarifies the role of phosphoinositides in effector-mediated membrane recruitment.
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