Related Experiment Video
Updated: May 3, 2026

Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Epitope-specific antibody response is controlled by immunoglobulin V(H) polymorphisms.
Bruno Raposo1, Doreen Dobritzsch, Changrong Ge
1Section for Medical Inflammation Research and 2 Section for Molecular Structural Biology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden.
Genetic variations in the variable heavy chain (VH) influence autoantibody responses to type II collagen (CII), a key factor in rheumatoid arthritis (RA) pathogenesis. This highlights the role of germline-encoded antibodies in autoimmune diseases.
Area of Science:
- Immunology
- Genetics
- Rheumatology
Background:
- Autoantibody formation is critical in autoimmune diseases like rheumatoid arthritis (RA).
- Anti-type II collagen (CII) antibodies are implicated in RA pathogenesis and cartilage damage.
- Autoreactivity to CII is conserved across species and targets multiple epitopes.
Purpose of the Study:
- To investigate the genetic basis of autoantibody responses to specific CII epitopes.
- To identify structural requirements for antibody recognition of CII epitopes.
- To understand the role of germline-encoded antibodies in autoimmune disease development.
Main Methods:
- Mapping antibody responses to CII in mice and associating them with the IgH locus.
- Gene sequencing to identify polymorphisms in variable heavy chain (VH) alleles.
- X-ray crystallography and site-directed mutagenesis to analyze antibody-epitope interactions.
Main Results:
- Polymorphisms at S31R and W33T in VH alleles were identified and linked to CII epitope recognition.
- Structural analysis confirmed the critical role of these variants in antigen binding.
- Back mutation to germline sequences indicated pre-existing recognition of the J1 epitope.
Conclusions:
- Epitope-specific autoantibody responses are genetically associated with specific VH alleles.
- Germline-encoded antibodies play a significant role in the pathogenesis of antibody-mediated autoimmune diseases.
- Understanding these genetic and structural factors can inform therapeutic strategies for RA.
Related Concept Videos
Antibody Structure
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Antibody Structure
Antibody Structure and Classes
The basic structure of an antibody consists of four protein chains: two identical heavy chains and two identical light chains. These chains are held together by disulfide bonds and other non-covalent interactions, forming a Y-shaped structure.
Hybridoma Technology
Hybridoma Selection
Commonly used fusion techniques — electroporation,...
Diversity of Antigen Receptors
Before encountering any antigen, lymphocytes express these receptors. On B cells, the antigen receptor is a membrane-bound antibody molecule called BCR; on T cells, it is a T cell receptor or TCR. B and T cell receptors are composed of two...
Cross-reactivity

