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jHeatmap: an interactive heatmap viewer for the web.

Jordi Deu-Pons1, Michael P Schroeder1, Nuria Lopez-Bigas2

  • 1Research Unit on Biomedical Informatics, Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Dr. Aiguader 88, Barcelona, Spain and Institució Catalana de Recerca i Estudis Avançats (ICREA), Passeig Lluís Companys, 23, Barcelona, Spain.

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Summary
This summary is machine-generated.

jHeatmap is a new web-based tool for visualizing and exploring complex omics data. This interactive matrix heatmap tool helps life scientists gain new insights from large datasets.

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Area of Science:

  • Life Sciences
  • Bioinformatics
  • Data Visualization

Background:

  • Omics data generation is feasible and widely used for life science research.
  • Effective data exploration requires intuitive and interactive visualization tools.
  • Matrix heatmaps are common for representing complex omics data.

Purpose of the Study:

  • To present jHeatmap, a novel web-based tool for interactive matrix heatmap visualization.
  • To provide an adaptable JavaScript library for embedding heatmap visualizations into web portals.

Main Methods:

  • Development of jHeatmap as a JavaScript library.
  • Implementation of interactive and customizable heatmap features.
  • Focus on ease of embedding into existing web portals with basic coding skills.

Main Results:

  • jHeatmap enables interactive visualization and exploration of data matrices.
  • The tool allows for customizable heatmap representations.
  • It is designed for seamless integration into web-based platforms.

Conclusions:

  • jHeatmap facilitates the exploration of large omics datasets.
  • Interactive visualization tools like jHeatmap are crucial for knowledge extraction in life sciences.
  • The tool supports the effective use of complex data for scientific discovery.