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Updated: May 2, 2026

Assessment of Immunologically Relevant Dynamic Tertiary Structural Features of the HIV-1 V3 Loop Crown R2 Sequence by ab initio Folding
Published on: September 15, 2010
Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies
Nicole A Doria-Rose1, Chaim A Schramm2, Jason Gorman1
11] Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA [2].
Researchers identified how neutralizing antibodies targeting HIV-1 envelope regions V1V2 develop. This involves selecting B cells with long complementarity-determining region H3, offering insights for HIV-1 vaccine design.
Area of Science:
- Immunology
- Virology
- Vaccine Development
Background:
- Neutralizing antibodies targeting HIV-1 envelope variable regions 1 and 2 (V1V2) are crucial for viral control.
- The precise mechanism by which these potent antibodies develop has remained largely undefined.
Purpose of the Study:
- To elucidate the developmental pathway of HIV-1 V1V2-directed neutralizing antibodies.
- To understand the molecular characteristics required for antibody-mediated neutralization of HIV-1.
Main Methods:
- Isolation and characterization of twelve somatically related neutralizing antibodies (CAP256-VRC26.01-12) from an HIV-1 infected donor (CAP256).
- Analysis of the antibody's antigen-binding loop (complementarity-determining region (CDR) H3) and its developmental timeline.
- Correlation of antibody maturation with viral population diversity and neutralization potency.
Main Results:
- Identified a characteristic protruding tyrosine-sulphated, anionic antigen-binding loop (CDR H3) in all isolated neutralizing antibodies.
- The unmutated ancestor antibody, with a 35-residue CDR H3, emerged between 30-38 weeks post-infection and neutralized a superinfecting virus.
- Enhanced neutralization breadth and potency were observed by week 59, following modest affinity maturation and significant viral diversification.
Conclusions:
- HIV-1 V1V2-directed neutralizing antibodies can develop relatively rapidly.
- Initial selection of B cells possessing a long CDR H3 is a key step in antibody development.
- Limited subsequent somatic hypermutation contributes to the maturation of these neutralizing antibodies, providing critical insights for HIV-1 vaccine strategies.
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