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Updated: May 2, 2026

A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
Long non-coding RNA HOTAIR is targeted and regulated by miR-141 in human cancer cells
Takeshi Chiyomaru1, Shinichiro Fukuhara, Sharanjot Saini
1From the Department of Urology, San Francisco Veterans Affairs Medical Center and University of California, San Francisco, San Francisco, California 94121.
Abstract:
HOTAIR is a long non-coding RNA that interacts with the polycomb repressive complex and suppresses its target genes. HOTAIR has also been demonstrated to promote malignancy. MicroRNA-141 (miR-141) has been reported to play a role in the epithelial to mesenchymal transition process, and the expression of miR-141 is inversely correlated with tumorigenicity and invasiveness in several human cancers. We found that HOTAIR expression is inversely correlated to miR-141 expression in renal carcinoma cells. HOTAIR promotes malignancy, including proliferation and invasion, whereas miR-141 suppresses malignancy in human cancer cells. miR-141 binds to HOTAIR in a sequence-specific manner and suppresses HOTAIR expression and functions, including proliferation and invasion. Both HOTAIR and miR-141 were associated with the immunoprecipitated Ago2 (Argonaute2) complex, and the Ago2 complex cleaved HOTAIR in the presence of miR-141. These results demonstrate that HOTAIR is suppressed by miR-141 in an Ago2-dependent manner.
Insights
MicroRNA-141 (miR-141) suppresses the long non-coding RNA HOTAIR, a known driver of cancer malignancy. This interaction occurs via the Ago2 complex, revealing a novel regulatory mechanism in human cancers.
Area of Science:
- Molecular Biology
- Genetics
- Oncology
Background:
- Long non-coding RNA HOTAIR interacts with the polycomb repressive complex, suppressing target genes and promoting cancer malignancy.
- MicroRNA-141 (miR-141) is implicated in epithelial-mesenchymal transition and its expression inversely correlates with cancer invasiveness.
- A negative correlation between HOTAIR and miR-141 expression was observed in renal carcinoma cells.
Purpose of the Study:
- To investigate the regulatory relationship between HOTAIR and miR-141 in human cancer cells.
- To elucidate the mechanism by which miR-141 affects HOTAIR expression and function.
- To determine the role of the Ago2 complex in this interaction.
Main Methods:
- Analysis of HOTAIR and miR-141 expression correlation in renal carcinoma cells.
- Assessment of HOTAIR's effects on cancer cell proliferation and invasion.
- Investigation of miR-141 binding to HOTAIR and its impact on HOTAIR expression and function.
- Co-immunoprecipitation assays to detect HOTAIR and miR-141 association with the Ago2 complex.
- In vitro cleavage assays to confirm Ago2-dependent degradation of HOTAIR.
Main Results:
- HOTAIR expression was inversely correlated with miR-141 expression in renal carcinoma.
- HOTAIR was found to promote cancer cell proliferation and invasion.
- miR-141 directly binds to HOTAIR, suppressing its expression and inhibitory functions on proliferation and invasion.
- Both HOTAIR and miR-141 were found in the Ago2 complex, and Ago2 mediated HOTAIR cleavage in the presence of miR-141.
Conclusions:
- miR-141 suppresses HOTAIR-driven malignancy in human cancer cells.
- The suppression of HOTAIR by miR-141 is dependent on the Ago2 complex, involving sequence-specific binding and subsequent cleavage.
- This study reveals a novel Ago2-dependent regulatory pathway where miR-141 acts as a tumor suppressor by targeting HOTAIR.
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