Disulfide bonds regulate binding of exogenous ligand to human cytoglobin

Hirofumi Tsujino1, Taku Yamashita1, Azusa Nose1

  • 1Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan.

Insights

Cytoglobin (Cgb) exists in multiple forms, including monomers, dimers, and tetramers, with varying affinities for cyanide and carbon monoxide. A disulfide bond in the monomer SS form is critical for regulating Cgb

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Protein Chemistry

Background:

  • Cytoglobin (Cgb) is a hexacoordinated globin-folded protein with an uncertain physiological role.
  • Previous studies reported crystal structures and proposed functions for Cgb, but its exact function remains elusive.

Purpose of the Study:

  • To investigate the multiple forms of Cytoglobin (Cgb) and their distinct ligand-binding properties.
  • To elucidate the role of cysteine residues and disulfide bonds in regulating Cgb's function.

Main Methods:

  • Measurement of cyanide binding to ferric wild-type (WT) Cgb.
  • Confirmation of Cgb forms (monomers, dimers, tetramers) using SDS-PAGE.
  • Separation of Cgb forms by gel-exclusion chromatography.
  • Analysis of cysteine states and preparation of cysteine variants (C38S, C83S).

Main Results:

  • WT Cgb binding to cyanide involved multiple steps, indicating the presence of several forms.
  • Monomers, dimers, and tetramers were identified, each with two distinguishable forms (SS and SH).
  • The monomer SS form exhibited the highest affinity for cyanide, while variants C38S and C83S mimicked the monomer SH form's affinity.

Conclusions:

  • Cytoglobin (Cgb) polymerization is a potential mechanism for its physiological functions.
  • Disulfide bonds between cysteine residues are critical for regulating Cgb's binding affinity for exogenous ligands.
  • Cgb's regulated ligand-binding affinity is crucial for its role as a reactive oxygen species (ROS) scavenger.

Related Concept Videos

Protein Modifications in the RER01:26

Protein Modifications in the RER

Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal...
5.6K
Metal-Ligand Bonds02:51

Metal-Ligand Bonds

The hemoglobin in the blood, the chlorophyll in green plants, vitamin B-12, and the catalyst used in the manufacture of polyethylene all contain coordination compounds. Ions of the metals, especially the transition metals, are likely to form complexes.
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
19.3K
Sulfur Assimilation01:20

Sulfur Assimilation

Sulfur is an essential element in biological systems, contributing to synthesizing key biomolecules, including amino acids such as cysteine and methionine, and cofactors such as coenzyme A and biotin. Microorganisms primarily assimilate sulfur as sulfate (SO₄²⁻) from the environment, which must undergo a series of biochemical transformations before it can be incorporated into cellular components. As sulfate is highly oxidized, it must undergo assimilatory sulfate reduction to...
554
Ligand Binding Sites02:40

Ligand Binding Sites

Proteins are dynamic macromolecules that carry out a wide variety of essential processes; however, the activities of most proteins depend on their interactions with other molecules or ions, known as ligands.
Protein-ligand interactions are quite specific; even though numerous potential ligands surround a cellular protein at any given time, only a particular ligand can bind to that protein. Moreover, a ligand binds only to a dedicated area on the surface of the protein, known as the...
11.9K
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
4.4K
Gene Families01:57

Gene Families

Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
8.0K