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Updated: May 2, 2026

Detection of Trypanosoma brucei Variant Surface Glycoprotein Switching by Magnetic Activated Cell Sorting and Flow Cytometry
Published on: October 19, 2016
Trypan blue exclusion assay by flow cytometry
B A Avelar-Freitas1, V G Almeida1, M C X Pinto2
1Laboratório de Imunologia, Departamento de Farmácia, Universidade Federal dos Vales do Jequitinhonha e Mucuri and Programa Multicêntrico de Pós-graduação em Ciências Fisiológicas, Diamantina, MG, Brasil.
This study introduces a flow cytometry method using trypan blue (TB) to reliably assess cell viability. This enhanced assay overcomes limitations of traditional TB tests, offering a quick and accurate alternative for cell analysis.
Area of Science:
- Cell Biology
- Immunology
- Biotechnology
Background:
- Dye exclusion assays, like trypan blue (TB), are standard for determining cell viability.
- Traditional TB assays have limitations, including dye uptake by live cells and analyst variability.
- Flow cytometry offers high sensitivity for cell analysis.
Purpose of the Study:
- To develop an alternative cell viability assay combining TB exclusion and flow cytometry.
- To address limitations of conventional TB assays for improved reliability and speed.
- To validate the use of TB-protein complexes' fluorescence for cell viability detection.
Main Methods:
- Utilized flow cytometry to detect fluorescence emitted by TB-protein complexes (TB/bovine serum albumin, TB/cytoplasmic proteins) at 660 nm.
- Optimized TB concentration to 0.002% (w/v) for distinguishing live (unstained) from dead (fluorescent) cells.
- Assessed TB's compatibility with green fluorescence markers (anti-CD3/FITC) in human T-cells.
Main Results:
- TB-protein complexes showed stable fluorescence emission at 660 nm for 30 minutes.
- Optimized TB concentration effectively differentiated live and dead cells without quenching green fluorescence.
- High correlation observed between TB+ and propidium iodide+ cells, validating the assay.
Conclusions:
- A flow cytometry-based TB exclusion assay provides a quick and reliable method for cell viability analysis.
- This method overcomes limitations of traditional TB assays, enhancing accuracy and reducing subjectivity.
- The assay is compatible with multicolor flow cytometry, expanding its utility in cell research.
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