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A wavelet method for modeling and despiking motion artifacts from resting-state fMRI time series
Ameera X Patel1, Prantik Kundu2, Mikail Rubinov3
1Behavioral and Clinical Neuroscience Institute, Department of Psychiatry, University of Cambridge, UK.
Neuroimage
|March 25, 2014
Summary
Head movement artifacts in functional magnetic resonance imaging (fMRI) can bias connectivity analysis. A new wavelet-based method, Wavelet Despike, effectively removes these motion confounds without data scrubbing.
Area of Science:
- Neuroimaging
- Signal Processing
- Biomedical Engineering
Background:
- In-scanner head movement significantly impacts functional magnetic resonance imaging (fMRI) signals.
- Traditional motion correction methods, like linear regression, are often insufficient to remove motion confounds.
- Even minor movements can introduce spurious biases in functional connectivity estimates.
Purpose of the Study:
- To introduce a novel data-driven, wavelet-based method for identifying, modeling, and removing motion artifacts in fMRI.
- To demonstrate the efficacy of the Wavelet Despike method in mitigating motion-related biases without data scrubbing.
Main Methods:
- A spatially-adaptive, wavelet-based approach called Wavelet Despike was developed.
- This method integrates as an additional step into standard fMRI pre-processing pipelines.
- The method was validated on resting-state fMRI data from three cohorts, including high-motion datasets.
Main Results:
- The Wavelet Despike method robustly removed various motion artifacts and motion-related biases, including distance-dependent connectivity artifacts.
- The method demonstrated effectiveness at both group and single-subject levels.
- It successfully accommodated spatial and temporal heterogeneity of motion artifacts, removing high and low-frequency artifacts.
Conclusions:
- A significant risk of motion-related bias exists in fMRI connectivity analysis.
- Effective time series denoising strategies, such as Wavelet Despike, can manage this risk.
- The Wavelet Despiking software is freely available for use.

