Epigenetic reprogramming of HOXC10 in endocrine-resistant breast cancer

Thushangi N Pathiraja1, Shweta R Nayak, Yuanxin Xi

  • 1Graduate Program in Translational Biology and Molecular Medicine, Baylor College of Medicine, Houston, TX 77030, USA.

Insights

Aromatase inhibitor resistance in breast cancer involves DNA methylation changes that silence the HOXC10 gene. Long-term treatment can lead to permanent HOXC10 repression, causing resistance and reduced apoptosis.

Area of Science:

  • Oncology
  • Epigenetics
  • Molecular Biology

Background:

  • Aromatase inhibitors (AIs) are crucial for estrogen receptor (ER)-positive breast cancer treatment.
  • Resistance to AIs remains a significant clinical challenge, limiting therapeutic efficacy.
  • Understanding the molecular mechanisms of AI resistance is vital for developing new treatment strategies.

Purpose of the Study:

  • To investigate the epigenetic alterations associated with AI resistance in ER-positive breast cancer.
  • To elucidate the role of the HOXC10 gene in AI resistance.
  • To identify potential therapeutic targets for overcoming AI resistance.

Main Methods:

  • Utilized two breast cancer cell line models of AI resistance.
  • Analyzed DNA methylation patterns, including promoter hypermethylation of developmental genes.
  • Investigated the role of ER binding sites, EZH2, and H3K27me3 in HOXC10 regulation.
  • Examined HOXC10 expression in paired primary and metastatic breast cancer specimens.

Main Results:

  • Identified widespread DNA hyper- and hypomethylation in AI-resistant cells, with enrichment for promoter hypermethylation.
  • Demonstrated that HOXC10 promoter methylation, overlapping an ER binding site, represses HOXC10 expression.
  • Showed that long-term AI treatment leads to increased DNA methylation and silencing of HOXC10 via EZH2 and H3K27me3.
  • Found reduced HOXC10 expression in recurrent tumors from patients treated with AIs, correlating with decreased apoptosis and AI resistance.

Conclusions:

  • Propose a model where estrogen initially represses HOXC10, but AIs initially induce it, leading to apoptosis.
  • Long-term AI treatment causes permanent HOXC10 silencing through epigenetic modifications, conferring resistance.
  • Therapies targeting AI-induced histone and DNA methylation may overcome or delay AI resistance in breast cancer.

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