Systems biology and proteomic analysis of cerebral cavernous malformation

Alexander R Edelmann1, Sarah Schwartz-Baxter, Christopher F Dibble

  • 1Department of Prosthodontics and the Dental Research Center, School of Dentistry, University of North Carolina, Chapel Hill, NC 27599, USA.

Abstract

Insights

Cerebral cavernous malformations (CCM) involve gene mutations leading to hemorrhagic stroke. Loss of CCM gene expression alters proteins, particularly cytoskeleton-associated ones like myosin-9, impacting cell interactions.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Vascular Biology

Background:

  • Cerebral cavernous malformations (CCM) are vascular anomalies linked to mutations in KRIT1, OSM, and PDCD10.
  • These mutations can lead to debilitating hemorrhagic strokes.

Purpose of the Study:

  • To investigate proteomic changes resulting from the loss of CCM gene expression.
  • To identify key proteins and pathways affected in CCM.

Main Methods:

  • Utilized human umbilical vein endothelial cells with knockdown of CCM genes.
  • Performed label-free differential protein expression analysis using multidimensional liquid chromatography/tandem mass spectrometry (ProteomeXchange ID: PXD000362).
  • Applied principle component and cluster analyses to identify differentially expressed proteins.

Main Results:

  • Identified 290 and 192 differentially expressed proteins (p < 0.005 and p < 0.001, respectively).
  • Found that cytoskeleton-associated proteins, notably myosin-9, were most commonly affected.
  • Pathway analysis indicated dysregulation of cytoskeletal proteins may cause defective cell-cell interactions in CCM.

Conclusions:

  • CCM pathogenesis may involve impaired cell-cell interactions due to altered cytoskeletal protein regulation.
  • This research provides insights into signaling pathways relevant for early CCM detection and novel therapeutic strategies.