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Intracellular Phosphoflow Cytometry of Acute Myeloid Leukemia Patient-Derived Xenotransplants
Published on: June 6, 2025
MLL-AF6 fusion oncogene sequesters AF6 into the nucleus to trigger RAS activation in myeloid leukemia
Elena Manara1, Emma Baron1, Claudia Tregnago1
1Women and Child Health Department, Hematology-Oncology Laboratory, Instituto di Ricerca Pediatrica, University of Padova, Padova, Italy;
Abstract:
A rare location, t(6;11)(q27;q23) (MLL-AF6), is associated with poor outcome in childhood acute myeloid leukemia (AML). The described mechanism by which MLL-AF6, through constitutive self-association and in cooperation with DOT-1L, activates aberrant gene expression does not explain the biological differences existing between t(6;11)-rearranged and other MLL-positive patients nor their different clinical outcome. Here, we show that AF6 is expressed in the cytoplasm of healthy bone marrow cells and controls rat sarcoma viral oncogene (RAS)-guanosine triphosphate (GTP) levels. By contrast, in MLL-AF6-rearranged cells, AF6 is found localized in the nucleus, leading to aberrant activation of RAS and of its downstream targets. Silencing MLL-AF6, we restored AF6 localization in the cytoplasm, thus mediating significant reduction of RAS-GTP levels and of cell clonogenic potential. The rescue of RAS-GTP levels after MLL-AF6 and AF6 co-silencing confirmed that MLL-AF6 oncoprotein potentiates the activity of the RAS pathway through retention of AF6 within the nucleus. Exposure of MLL-AF6-rearranged AML blasts to tipifarnib, a RAS inhibitor, leads to cell autophagy and apoptosis, thus supporting RAS targeting as a novel potential therapeutic strategy in patients carrying t(6;11). Altogether, these data point to a novel role of the MLL-AF6 chimera and show that its gene partner, AF6, is crucial in AML development.
Insights
The MLL-AF6 fusion protein in acute myeloid leukemia (AML) causes the AF6 protein to move to the nucleus, activating the RAS pathway. Inhibiting RAS shows promise for treating this rare AML subtype.
Area of Science:
- Hematology
- Molecular Biology
- Cancer Research
Background:
- The t(6;11)(q27;q23) translocation, forming the MLL-AF6 fusion, is linked to poor prognosis in childhood acute myeloid leukemia (AML).
- Existing models of MLL-AF6's mechanism do not fully explain the distinct clinical outcomes observed in t(6;11)-rearranged AML compared to other MLL-positive leukemias.
Purpose of the Study:
- To elucidate the specific role of AF6 protein localization in the pathogenesis of MLL-AF6-rearranged AML.
- To investigate the functional consequences of aberrant AF6 nuclear localization on cellular signaling pathways.
- To explore potential therapeutic strategies targeting the RAS pathway in t(6;11) AML.
Main Methods:
- Immunofluorescence microscopy to determine AF6 subcellular localization in healthy and MLL-AF6-rearranged cells.
- Gene silencing techniques (siRNA) to modulate MLL-AF6 and AF6 expression.
- Assessment of RAS-guanosine triphosphate (GTP) levels.
- Evaluation of cell clonogenic potential.
- Treatment of AML blasts with tipifarnib, a RAS inhibitor, followed by analysis of cell death pathways (autophagy and apoptosis).
Main Results:
- In healthy bone marrow cells, AF6 is cytoplasmic and regulates RAS-GTP levels.
- In MLL-AF6-rearranged AML cells, AF6 is aberrantly localized in the nucleus, leading to increased RAS-GTP levels and downstream target activation.
- Silencing MLL-AF6 restored cytoplasmic AF6 localization, reduced RAS-GTP levels, and decreased cell clonogenicity.
- Co-silencing of MLL-AF6 and AF6 rescued RAS-GTP levels, confirming MLL-AF6's role in nuclear AF6 retention and RAS pathway potentiation.
- Tipifarnib treatment induced autophagy and apoptosis in MLL-AF6-rearranged AML blasts.
Conclusions:
- The MLL-AF6 chimera potentiates RAS pathway activity by sequestering AF6 in the nucleus.
- AF6 nuclear retention is a critical mechanism in the development of MLL-AF6-rearranged AML.
- Targeting the RAS pathway with inhibitors like tipifarnib represents a promising therapeutic avenue for patients with t(6;11) AML.
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