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Updated: May 1, 2026

Using the Overlay Assay to Qualitatively Measure Bacterial Production of and Sensitivity to Pneumococcal Bacteriocins
Published on: September 30, 2014
Streptococcus pneumoniae detects and responds to foreign bacterial peptide fragments in its environment
Lucy J Hathaway1, Patrick Bättig, Sandra Reber
1Institute for Infectious Diseases, University of Bern, Bern, Switzerland.
Abstract:
Streptococcus pneumoniae is an important cause of bacterial meningitis and pneumonia but usually colonizes the human nasopharynx harmlessly. As this niche is simultaneously populated by other bacterial species, we looked for a role and pathway of communication between pneumococci and other species. This paper shows that two proteins of non-encapsulated S. pneumoniae, AliB-like ORF 1 and ORF 2, bind specifically to peptides matching other species resulting in changes in the pneumococci. AliB-like ORF 1 binds specifically peptide SETTFGRDFN, matching 50S ribosomal subunit protein L4 of Enterobacteriaceae, and facilitates upregulation of competence for genetic transformation. AliB-like ORF 2 binds specifically peptides containing sequence FPPQS, matching proteins of Prevotella species common in healthy human nasopharyngeal microbiota. We found that AliB-like ORF 2 mediates the early phase of nasopharyngeal colonization in vivo. The ability of S. pneumoniae to bind and respond to peptides of other bacterial species occupying the same host niche may play a key role in adaptation to its environment and in interspecies communication. These findings reveal a completely new concept of pneumococcal interspecies communication which may have implications for communication between other bacterial species and for future interventional therapeutics.
Insights
Streptococcus pneumoniae communicates with other bacteria in the human nasopharynx. Specific proteins on S. pneumoniae bind to peptides from other species, influencing its behavior and colonization.
Area of Science:
- Microbiology
- Bacterial communication
- Host-pathogen interactions
Background:
- Streptococcus pneumoniae causes pneumonia and meningitis but typically colonizes the nasopharynx asymptomatically.
- The nasopharynx hosts diverse bacterial species, suggesting potential for interspecies interactions.
- Understanding these interactions is crucial for deciphering pneumococcal adaptation and pathogenesis.
Purpose of the Study:
- To investigate communication pathways between Streptococcus pneumoniae and other nasopharyngeal bacteria.
- To identify specific molecular mechanisms involved in interspecies recognition and response.
- To explore the role of these interactions in pneumococcal colonization and adaptation.
Main Methods:
- Analysis of non-encapsulated S. pneumoniae strains.
- Identification and characterization of proteins involved in peptide binding.
- In vitro binding assays with specific bacterial peptides.
- In vivo studies to assess the role of identified proteins in nasopharyngeal colonization.
Main Results:
- Two S. pneumoniae proteins, AliB-like ORF 1 and ORF 2, were identified.
- AliB-like ORF 1 specifically binds to Enterobacteriaceae peptides, upregulating competence for genetic transformation.
- AliB-like ORF 2 binds to Prevotella species peptides, mediating early nasopharyngeal colonization.
- These interactions demonstrate a novel form of interspecies communication.
Conclusions:
- Streptococcus pneumoniae actively senses and responds to other bacterial species in its niche.
- Interspecies peptide recognition plays a significant role in pneumococcal adaptation and colonization.
- This discovery opens new avenues for understanding bacterial communities and developing therapeutics.
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