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Methods to Classify Cytoplasmic Foci as Mammalian Stress Granules
Published on: May 12, 2017
Induction of stress granules by interferon and down-regulation by the cellular RNA adenosine deaminase ADAR1
1Department of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, CA 93106, United States.
Abstract:
Measles virus (MV) deficient in C protein (C(ko)) expression efficiently induces both stress granules (SG) and interferon (IFNβ), whereas isogenic wild-type (WT) and V mutant (V(ko)) viruses do not. We therefore examined the effect of IFNβ pretreatment on SG formation, and the roles played by the IFN-inducible double-stranded (ds) RNA-dependent protein kinase (PKR) and dsRNA adenosine deaminase (ADAR1). SG formation in ADAR1-sufficient cells infected with WT or V(ko) mutant virus was enhanced by IFN treatment and was PKR-dependent. SG formation in C(ko) virus-infected cells was already high without IFN treatment and was not further enhanced by IFN. IFN treatment alone, in the absence of infection, induced SG formation in ADAR1-deficient but not ADAR1-sufficient cells. Type I IFN-induced enhancement in SG formation occurred by a canonical IFN signaling response dependent upon STAT1 and STAT2. These results further establish ADAR1 as a suppressor of the interferon and SG innate immune responses.
Insights
Measles virus lacking C protein induces stress granules and interferon. Interferon pretreatment enhances this response, which is PKR-dependent, revealing ADAR1 as a suppressor of innate immunity.
Area of Science:
- Virology
- Immunology
- Cell Biology
Background:
- Measles virus (MV) infection impacts cellular innate immune responses.
- Stress granules (SG) and interferon (IFN) are key antiviral defense mechanisms.
- The roles of specific MV proteins and IFN-inducible factors in SG formation are not fully understood.
Purpose of the Study:
- To investigate the induction of stress granules (SG) by measles virus (MV) variants.
- To determine the role of interferon-beta (IFNβ) pretreatment in SG formation.
- To elucidate the involvement of protein kinase R (PKR) and ADAR1 in the IFN-mediated SG response.
Main Methods:
- Infection of cells with wild-type (WT), C protein-deficient (C(ko)), and V protein-deficient (V(ko)) MV.
- IFNβ pretreatment of cells prior to viral infection.
- Assessment of SG formation.
- Analysis of PKR and ADAR1 involvement using genetic or pharmacological approaches.
- Investigation of STAT1 and STAT2 signaling pathways.
Main Results:
- C(ko) MV efficiently induced SG and IFNβ, unlike WT and V(ko) MV.
- IFNβ pretreatment enhanced SG formation in WT and V(ko) MV-infected cells, dependent on PKR.
- IFN treatment alone induced SG in ADAR1-deficient cells but not ADAR1-sufficient cells.
- IFN-induced SG formation relied on STAT1 and STAT2 signaling.
Conclusions:
- ADAR1 acts as a suppressor of both interferon and stress granule innate immune responses.
- The C protein of MV plays a critical role in modulating SG and IFN induction.
- IFN signaling pathways, involving PKR, STAT1, and STAT2, are crucial for SG formation during MV infection.
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