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Preparation and In Vivo Use of an Activity-based Probe for N-acylethanolamine Acid Amidase
Published on: November 23, 2016
N-(4-Methyl-phenyl-sulfon-yl)-3-nitro-benzamide
S Sreenivasa1, M S Nanjundaswamy2, A G Sudha3
1Department of Studies and Research in Chemistry, Tumkur University, Tumkur, Karnataka 572 103, India.
This study details the crystal structure of a novel organic compound, C14H12N2O5S. Molecular conformation and intermolecular interactions, including hydrogen bonds, dictate its crystal packing into sheets.
Area of Science:
- Crystallography and Molecular Structure
- Organic Chemistry
- Supramolecular Chemistry
Background:
- Understanding the three-dimensional arrangement of atoms in organic molecules is crucial for predicting their properties and reactivity.
- Intermolecular forces, such as hydrogen bonding and van der Waals interactions, play a significant role in the self-assembly of molecules in the solid state.
Purpose of the Study:
- To elucidate the crystal structure of the title compound, C14H12N2O5S.
- To analyze the molecular conformation and identify the types and patterns of intermolecular interactions present in the crystal lattice.
Main Methods:
- Single-crystal X-ray diffraction was employed to determine the atomic coordinates and unit cell parameters.
- Analysis of bond lengths, bond angles, dihedral angles, and torsion angles to describe the molecular conformation.
- Identification and characterization of intermolecular interactions (hydrogen bonds, C-H···O interactions) using geometric criteria.
Main Results:
- The dihedral angle between the aromatic rings is 86.29(1)°, indicating a near-orthogonal arrangement.
- The molecule adopts an L-shaped conformation with a syn conformation between the amide C=O and meta-NO2 groups.
- Inversion dimers are formed via N-H···O hydrogen bonds and C-H···O interactions, creating R2(2)(8) and R2(2)(14) loops, respectively. These dimers further assemble into (100) sheets through additional C-H···O interactions.
Conclusions:
- The crystal structure of C14H12N2O5S reveals specific conformational preferences and a well-defined network of intermolecular interactions.
- The observed hydrogen bonding and C-H···O interactions are key to the formation of supramolecular assemblies, specifically inversion dimers and extended sheets.
- This detailed structural information provides a foundation for understanding the physical and chemical properties of this compound.
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