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Molecular cloning and characterization of cDNA encoding mouse cytokeratin no. 19
Y Ichinose1, K Hashido, H Miyamoto
1Department of Microbial Genetics, Osaka University, Japan.
Abstract:
We have isolated cDNA clones encoding the mouse cytokeratin No. 19 (Ck 19) from an intestinal cDNA library using synthetic oligodeoxyribonucleotides as probes. We obtained four independent clones, which correspond to about 1.4-kb of ck19 cDNA. Nucleotide sequence analysis revealed that these cDNAs encode a protein of 44,541 Da composed of 403 amino acids (aa). The deduced aa sequence defines an alpha-helical central domain, and suggests that the protein lacks a C-terminal non-alpha-helical tail segment, characteristic of the human and bovine 40-kDa keratins (Ck19). The overall aa identity between mouse Ck19 and human and bovine Ck19 is very high, 82.7% and 82.4%, respectively. The coil-forming central domain of mouse Ck19 has 45-65% similarity to other type-I Ck polypeptides, while it displays only 20-30% similarity to type-II Ck polypeptides. Northern blot analysis showed that mouse ck19 mRNA is strongly expressed in adult intestine, stomach and uterus. Interestingly, it is expressed in a placental cell line and a retinoic acid-treated mouse teratocarcinoma cell line (F9), but not in a parietal yolk sac endoderm-like cell line (PYS-2). This pattern of expression is very similar to that for the mouse gene encoding extra-embryonic endodermal cytoskeletal protein C (EndoC), suggesting they may be the same.
Insights
Researchers isolated mouse cytokeratin 19 (Ck19) cDNA, revealing a protein structure similar to human and bovine Ck19. Mouse Ck19 mRNA expression was observed in adult tissues and specific cell lines, suggesting potential roles in development.
Area of Science:
- Molecular Biology
- Cell Biology
- Developmental Biology
Background:
- Cytokeratins (Ck) are intermediate filament proteins crucial for cellular structure.
- Cytokeratin 19 (Ck19) is a type I keratin found in various epithelial tissues.
- Understanding the structure and expression of Ck19 is important for cell biology and disease research.
Purpose of the Study:
- To isolate and characterize cDNA clones encoding mouse cytokeratin 19 (Ck19).
- To analyze the deduced amino acid sequence and compare it with homologous proteins.
- To investigate the expression pattern of mouse Ck19 mRNA in different tissues and cell lines.
Main Methods:
- Isolation of cDNA clones from a mouse intestinal cDNA library using synthetic oligodeoxyribonucleotides.
- Nucleotide sequence analysis to determine protein size, amino acid composition, and structural domains.
- Northern blot analysis to detect and quantify Ck19 mRNA expression.
Main Results:
- Four independent cDNA clones encoding mouse Ck19 were isolated, corresponding to a 1.4-kb cDNA.
- The deduced protein (44,541 Da, 403 amino acids) shares high overall amino acid identity (82.7-82.4%) with human and bovine Ck19.
- Mouse Ck19 mRNA is highly expressed in adult intestine, stomach, and uterus, and in a placental cell line and F9 teratocarcinoma cells, but not in PYS-2 cells.
Conclusions:
- Mouse Ck19 exhibits structural similarities to other mammalian Ck19 proteins, particularly in its central alpha-helical domain.
- The expression pattern of mouse Ck19 suggests a role in specific epithelial tissues and developmental processes.
- The observed expression profile in F9 cells and its similarity to EndoC expression indicate a potential shared regulatory mechanism or function.
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