On the assessment of time-resolved diffraction results
Bertrand Fournier1, Philip Coppens1
1Chemistry Department, University at Buffalo, State University of New York, Buffalo, NY 14260-3000, USA.
New R-factor metrics for pump-probe crystallography experiments aid in analyzing structural changes. These factors, similar to standard crystallographic refinements, help visualize electron density shifts and validate models.
Area of Science:
- Crystallography
- Structural Biology
- Biophysics
Background:
- Dynamic structure experiments require metrics to assess data quality and visualize changes.
- Standard crystallographic refinement factors (R1, wR2) are widely used but not directly applicable to time-resolved data.
Purpose of the Study:
- To introduce and evaluate new agreement factors for pump-probe crystallography.
- To demonstrate the utility of Fourier photodifference and photodeformation maps for analyzing structural dynamics.
Main Methods:
- Development of R-factor metrics based on intensity ratios with and without perturbation.
- Application of Fourier photodifference maps to visualize electron density changes.
- Utilizing photodeformation maps to highlight structural alterations.
Main Results:
- R-factors analogous to R1 and wR2 were developed for dynamic crystallography.
- Eta-based R-factors were found to be unsuitable for comparing different datasets.
- Fourier photodifference and photodeformation maps effectively visualize and confirm structural changes.
Conclusions:
- The proposed R-factor metrics provide valuable indicators for dynamic structure analysis.
- Photodifference and photodeformation maps are essential tools for refining and validating models of light-induced structural changes.
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