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Published on: January 27, 2019
The impact of postnatal antibiotics on the preterm intestinal microbiome
Majd Dardas1, Steven R Gill2, Alex Grier3
1Division of Neonatology, Department of Pediatrics, University of Rochester Medical Center, Rochester, New York.
Insights
Antibiotic duration impacts preterm infant gut microbiome development. Longer antibiotic exposure, particularly within the first 10 days, reduced microbial diversity and altered bacterial composition.
Area of Science:
- Neonatal microbiome research
- Microbiome development
- Infant health
Background:
- Intestinal microbiome development is crucial for preterm infant health.
- Antibiotic exposure is common in preterm infants.
- Understanding antibiotic impact on the infant gut microbiome is essential.
Purpose of the Study:
- To investigate the effect of antibiotic duration on the intestinal microbiome in preterm infants.
- To compare microbiome composition in infants receiving short-term versus longer-term antibiotic therapy.
Main Methods:
- Rectal swabs collected at 10 and 30 days from preterm infants (24 0/7-31 6/7 weeks gestational age).
- 16S rRNA pyrosequencing used to analyze the rectal microbiome.
- Comparison between infants receiving 2 days vs. at least 7 days of antibiotics.
Main Results:
- A decrease in microbial diversity was observed at 10 days in infants receiving longer antibiotic durations.
- Differences in diversity and richness were less pronounced by 30 days.
- Abundant phyla at 10 days were Firmicutes and Bacteroidetes; by 30 days, Proteobacteria and Actinobacteria increased.
Conclusions:
- Preterm neonates continue to acquire gut bacteria despite antibiotic treatment.
- Antibiotic therapy perturbs the natural process of bacterial acquisition in the neonatal gut.
Background:
Development of the intestinal microbiome in preterm infants has significant impact on infant health. Our objective was to determine if duration of antibiotics within the first 10 and 30 d after birth affects the intestinal microbiome.
Methods:
Subjects were 24 0/7-31 6/7 wk of gestational age who received ≥ 50% breast milk and a total of ≥ 100 ml/kg of feeds by 10 d. Rectal (fecal) swabs were collected at 10 and 30 d and analyzed by 16S rRNA pyrosequencing. At both time points, we examined the rectal microbiome from infants who received only 2 d of antibiotics and those who received at least 7 d of antibiotics.
Results:
In the 29 infants enrolled in our study, we found a decrease in diversity index from 10 d samples in those who received more antibiotics. Such difference in diversity and richness was not as pronounced in 30 d samples. Firmicutes and Bacteroidetes were most abundant in the 10 d samples. While these two phyla remained dominant in 30 d samples, there was an increase in Proteobacteria and Actinobacteria.
Conclusion:
Despite antibiotic therapy, neonates continued to acquire bacteria in the gastrointestinal tract. The process of bacterial acquisition is perturbed with the use of antibiotics.
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