Haplotype-specific modulation of a SOX10/CREB response element at the Charcot-Marie-Tooth disease type 4C locus

Megan Hwa Brewer1, Ki Hwan Ma2, Gary W Beecham3

  • 1Department of Human Genetics.

Insights

Mutations in the SH3TC2 gene cause Charcot-Marie-Tooth neuropathy. This study identifies regulatory elements and transcription factors (SOX10, CREB) controlling SH3TC2 expression, revealing a SNP that impacts disease severity.

Area of Science:

  • Neuroscience
  • Genetics
  • Molecular Biology

Background:

  • Loss-of-function mutations in SH3TC2 cause demyelinating Charcot-Marie-Tooth neuropathy.
  • SH3TC2 protein is crucial for promyelination via neuregulin-1 and ERBB2 signaling.
  • Transcriptional regulation of the SH3TC2 gene remains largely uncharacterized.

Purpose of the Study:

  • To elucidate the transcriptional regulation of the SH3TC2 gene.
  • To identify cis-acting regulatory elements and their controlling transcription factors.
  • To investigate the impact of a specific SNP on SH3TC2 regulation and Charcot-Marie-Tooth disease phenotypes.

Main Methods:

  • Computational and functional analyses to identify regulatory elements.
  • Reporter gene assays in Schwann cells to assess enhancer activity.
  • Electrophoretic mobility shift assays and in vitro binding assays to study transcription factor interactions.
  • Analysis of SNP genotypes in relation to Charcot-Marie-Tooth type 1A (CMT1A) disease severity.

Main Results:

  • Two cis-acting regulatory elements were identified: one promoter and one downstream enhancer.
  • Both elements are responsive to SOX10 and direct reporter gene expression in Schwann cells.
  • A single-nucleotide polymorphism (SNP) in the downstream enhancer significantly reduces its activity by ~80%.
  • This SNP disrupts a CREB binding site, and SH3TC2 is confirmed as a CREB target gene.
  • SH3TC2 SNP alleles showed associations with differential disease severity in CMT1A patients.

Conclusions:

  • SH3TC2 gene expression is regulated by transcription factors SOX10 and CREB.
  • A novel regulatory SNP within a CREB binding site at the SH3TC2 locus influences enhancer activity.
  • SH3TC2 acts as a potential modifier locus for Charcot-Marie-Tooth disease phenotypes.

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