Intersection of MicroRNA and gene regulatory networks and their implication in cancer

Malik Yousef, Hung V Trinh, Jens Allmer1

  • 1Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir, Turkey. jens@allmer.de.

Insights

MicroRNAs (miRNAs) are key regulators of gene expression, influencing protein levels and forming complex networks with gene regulatory pathways. This review explores their role in cancer and personalized medicine.

Area of Science:

  • Molecular Biology
  • Genetics
  • Bioinformatics

Background:

  • MicroRNAs (miRNAs) function as post-transcriptional regulators of gene expression.
  • Most human genes are targets of or harbor miRNAs, indicating their widespread regulatory roles.
  • miRNAs interact with transcription factors and gene regulatory networks, forming complex expression control systems.

Purpose of the Study:

  • To review the intricate regulatory roles of microRNAs in gene expression.
  • To discuss the involvement of miRNAs in cancer development and regulatory network formation.
  • To provide an outlook on personalized medicine applications of miRNA research.

Main Methods:

  • Literature review of gene regulatory networks.
  • Analysis of microRNA functions and their involvement in cancer.
  • Exploration of miRNA-gene interactions and network modeling.

Main Results:

  • miRNAs can up- and downregulate protein expression, affecting hundreds of target transcripts.
  • miRNA expression is often coordinated with gene expression, creating intertwined regulatory networks.
  • miRNAs play significant roles in cancer, forming complex regulatory circuits.

Conclusions:

  • MicroRNAs are integral components of gene regulatory networks with broad implications.
  • Understanding miRNA networks is crucial for cancer research and the development of personalized medicine.
  • Future research directions include further elucidating miRNA functions and therapeutic applications.

Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
3.0K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
21.1K
MicroRNAs01:22

MicroRNAs

9.8K
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...
3.6K
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

1.5K
lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
7.5K