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Virus world as an evolutionary network of viruses and capsidless selfish elements
Eugene V Koonin1, Valerian V Dolja2
1National Center for Biotechnology Information, National Library of Medicine, Bethesda, Maryland, USA koonin@ncbi.nlm.nih.gov.
The "greater virus world" encompasses viruses and capsidless genetic elements, sharing hallmark genes. This concept redefines viruses not by capsids, but by genetic parasitism and host reliance.
Area of Science:
- Virology
- Evolutionary Biology
- Genetics
Background:
- Viruses are traditionally defined as capsid-encoding organisms, distinct from cellular life.
- Homologous capsids in diverse viruses suggest ancient viral lineages.
- Viral evolution is modular, with hallmark genes found across different viral types.
Purpose of the Study:
- To propose the concept of a "greater virus world" encompassing both capsid-encoding viruses and capsidless genetic elements.
- To redefine the fundamental nature of viruses beyond capsid presence.
- To explore the evolutionary network of viruses and selfish genetic elements.
Main Methods:
- Review of existing literature on viral structure, genetics, and evolution.
- Analysis of shared conserved genes between viruses and other replicons.
- Theoretical considerations of replicator dynamics and parasitic emergence.
Main Results:
- Capsidless selfish genetic elements (plasmids, transposons) share hallmark genes with viruses.
- Viruses and capsidless elements have likely evolved from each other multiple times.
- The earliest precellular life likely involved capsidless genetic parasites.
Conclusions:
- The "greater virus world" is an evolutionary network linked by shared genes.
- The defining characteristic of this world is genetic parasitism, not the presence of a capsid.
- Viruses and related elements represent diverse degrees of reliance on host information systems.
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