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Updated: Apr 29, 2026

Reconstitution of a Kv Channel into Lipid Membranes for Structural and Functional Studies
Published on: July 13, 2013
Daptomycin forms cation- and size-selective pores in model membranes
TianHua Zhang1, Jawad K Muraih2, Ben MacCormick3
1Department of Chemistry, University of Waterloo, Waterloo, Ontario, Canada.
Abstract:
Daptomycin is a lipopeptide antibiotic that is used clinically to treat severe infections caused by Gram-positive bacteria. Its bactericidal action involves the calcium-dependent binding to membranes containing phosphatidylglycerol, followed by the formation of membrane-associated oligomers. Bacterial cells exposed to daptomycin undergo membrane depolarization, suggesting the formation of channels or pores in the target membranes. We here used a liposome model to detect and characterize the permeability properties of the daptomycin pores. The pores are selective for cations, with permeabilities being highest for Na(+), K(+), and other alkali metal ions. The permeability is approximately twice lower for Mg(++), and lower again for the organic cations choline and hexamethonium. Anions are excluded, as is the zwitterion cysteine. These observations account for the observed depolarization of bacterial cells by daptomycin and suggest that under typical in vivo conditions depolarization is mainly due to sodium influx.
Insights
Daptomycin forms calcium-dependent pores in bacterial membranes. These pores are selective for cations like sodium and potassium, explaining how daptomycin depolarizes and kills Gram-positive bacteria.
Area of Science:
- Microbiology
- Biochemistry
- Pharmacology
Background:
- Daptomycin is a critical lipopeptide antibiotic for treating severe Gram-positive bacterial infections.
- Its mechanism involves calcium-dependent membrane binding and oligomerization, leading to bacterial cell death.
- Observed bacterial membrane depolarization suggests daptomycin forms pores.
Purpose of the Study:
- To characterize the permeability properties of daptomycin-induced pores using a liposome model.
- To elucidate the specific ion selectivity of these daptomycin pores.
Main Methods:
- Utilized a liposome model system to investigate daptomycin pore formation.
- Assessed the permeability of various ions, including cations and anions, through these pores.
Main Results:
- Daptomycin pores are selective for cations, with highest permeability for alkali metal ions (Na+, K+).
- Permeability is reduced for divalent cations (Mg++) and organic cations (choline, hexamethonium).
- Anions and zwitterions like cysteine are excluded from the pores.
Conclusions:
- The characterized daptomycin pores explain the observed bacterial membrane depolarization.
- Sodium influx through these selective cation pores is the primary driver of depolarization in vivo.
- Findings provide insight into the molecular mechanism of daptomycin's bactericidal activity.
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