Molecular conformation of the full-length tumor suppressor NF2/Merlin--a small-angle neutron scattering study

Jahan Ali Khajeh1, Jeong Ho Ju1, Moussoubaou Atchiba1

  • 1Department of Chemistry, City College of New York and CUNY Graduate Center, NY, USA.

Insights

The tumor suppressor Merlin protein

Area of Science:

  • Cell biology
  • Molecular biology
  • Biochemistry

Background:

  • Merlin, a tumor suppressor, regulates cell proliferation via cell-cell contacts.
  • Its function is often explained by structural models of the Ezrin-Radixin-Moesin (ERM) protein family.
  • Recent studies suggest alternative models for Merlin's molecular function.

Purpose of the Study:

  • To determine the low-resolution molecular structure and binding activity of Merlin and a phosphorylation mimic mutant (Merlin S518D).
  • To investigate Merlin's conformational changes upon binding to NHERF1 and phosphatidylinositol 4,5-bisphosphate.
  • To resolve controversies regarding Merlin's molecular conformation and binding activity.

Main Methods:

  • Small-angle neutron scattering (SANS) to determine low-resolution molecular structures.
  • Biochemical binding experiments to assess protein-protein and protein-lipid interactions.
  • Analysis of wild-type Merlin and a Merlin(S518D) mutant.

Main Results:

  • Both Merlin and Merlin(S518D) adopt a closed conformation in solution.
  • A significant fraction of both Merlin and Merlin(S518D) can bind to the target protein NHERF1.
  • Wild-type Merlin adopts a more open conformation upon binding phosphatidylinositol 4,5-bisphosphate, while Merlin(S518D) remains closed.

Conclusions:

  • Findings support a rheostat model for Merlin's interaction with NHERF1.
  • Merlin's conformational state is influenced by phosphorylation and binding partners.
  • This study clarifies the molecular mechanisms underlying Merlin's tumor suppressor function.

Related Concept Videos

Conformations of Cyclohexane02:11

Conformations of Cyclohexane

Cyclohexane does not exist in a planar form due to the high angle and torsional strain it would experience in the planar structure. Instead, it adopts non-planar chair and boat conformations.
The chair form is the most stable and derives its name from its resemblance to the “easy chair.” In the chair conformation, two carbon atoms are arranged out-of-plane — one above and one below, minimizing the torsional strain. In the chair form, the bond angle is very close to the ideal tetrahedral value,...
¹H NMR of Conformationally Flexible Molecules: Temporal Resolution00:52

¹H NMR of Conformationally Flexible Molecules: Temporal Resolution

At room temperature, the chair conformer of cyclohexane undergoes rapid ring flipping between two equivalent chair conformers at a rate of approximately 105 times per second. These two chair conformers are in equilibrium. The rapid ring flipping results in the interconversion of the axial proton to an equatorial proton and an equatorial to the axial proton. Such interconversions are too rapid and cannot be detected on the NMR timescale. Hence, the NMR spectrometer cannot distinguish between the...
¹H NMR of Conformationally Flexible Molecules: Variable-Temperature NMR01:15

¹H NMR of Conformationally Flexible Molecules: Variable-Temperature NMR

The axial and equatorial protons in cyclohexane can be distinguished by performing a variable-temperature NMR experiment. In this process, except for one proton, the remaining eleven protons are replaced by deuterium. The deuterium substitution avoids the possible peak splitting caused by the spin-spin coupling between the adjacent protons. The remaining proton flips between the axial and equatorial positions.