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The plant glycosyltransferase clone collection for functional genomics
Jeemeng Lao1, Ai Oikawa, Jennifer R Bromley
1Joint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
The Plant Journal : for Cell and Molecular Biology
|June 7, 2014
Summary
Researchers developed a plant glycosyltransferases (GTs) clone resource, enabling functional genomics. This collection aids in understanding plant-specific processes like cell-wall biosynthesis and secondary metabolite production.
Area of Science:
- Plant biochemistry
- Enzymology
- Molecular biology
Background:
- Glycosyltransferases (GTs) are crucial enzymes in plant glycan and glycoside biosynthesis.
- Plants possess large GT families (e.g., >450 in Arabidopsis, >600 in rice) classified into over 40 families.
- Despite their importance in cell-wall and secondary metabolite synthesis, few GTs are functionally characterized.
Purpose of the Study:
- To create a comprehensive plant GT clone resource for functional genomic studies.
- To facilitate the research community's ability to investigate GT functions in plants.
Main Methods:
- Cloning of 403 (88%) CAZy-defined Arabidopsis GTs and 96 (15%) rice GTs.
- Generation of Gateway®-compatible, full-length coding sequence clones without termination codons.
- Construction of particle bombardment plasmids (pBullet) with endomembrane markers to demonstrate clone utility.
Main Results:
- A significant resource of cloned plant GTs was established, including updates to Arabidopsis GT gene models.
- The pBullet plasmids enabled localization of Arabidopsis GT14 family members to the Golgi apparatus and endoplasmic reticulum (ER).
Conclusions:
- The JBEI GT Collection provides a valuable resource for plant functional genomics.
- The developed plasmids and clones facilitate GT functional characterization and subcellular localization studies in plants.

