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Deducing fast electron density changes in randomly orientated uncrystallized biomolecules in a pump-probe experiment
K Pande1, P Schwander1, M Schmidt1
1Department of Physics, University of Wisconsin-Milwaukee, Milwaukee, WI 53211, USA.
Abstract:
We propose a method for deducing time-resolved structural changes in uncrystallized biomolecules in solution. The method relies on measuring the angular correlations of the intensities, when averaged over a large number of diffraction patterns from randomly oriented biomolecules in solution in a liquid solvent. The experiment is somewhat like a pump-probe version of an experiment on small angle X-ray scattering, except that the data expected by the algorithm are not just the radial variation of the averaged intensities. The differences of these correlation functions as measured from a photoexcited and dark structure enable the direct calculation of the difference electron density with a knowledge of only the dark structure. We exploit a linear relation we derive between the difference in these correlation functions and the difference electron density, applicable for small structural changes.
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