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Published on: March 5, 2018
Structural insights into the coenzyme mediated monomer-dimer transition of the pro-apoptotic apoptosis inducing
Patricia Ferreira1, Raquel Villanueva, Marta Martínez-Júlvez
1Departamento de Bioquímica y Biología Molecular y Celular, ‡Instituto de Biocomputación y Física de Sistemas Complejos (BIFI)-Joint Unit BIFI-IQFR (CSIC), and §Laboratorio de Microscopias Avanzadas, Instituto de Nanociencia de Aragón (INA), Universidad de Zaragoza , Zaragoza, Spain.
Abstract:
The apoptosis-inducing factor (AIF) is a mitochondrial-flavoprotein that, after cell death induction, is distributed to the nucleus to mediate chromatinolysis. In mitochondria, AIF is present in a monomer-dimer equilibrium that after reduction by NADH gets displaced toward the dimer. The crystal structure of the human AIF (hAIF):NAD(H)-bound dimer revealed one FAD and, unexpectedly, two NAD(H) molecules per protomer. A 1:2 hAIF:NAD(H) binding stoichiometry was additionally confirmed in solution by using surface plasmon resonance. The here newly discovered NAD(H)-binding site includes residues mutated in human disorders, and accommodation of the coenzyme in it requires restructuring of a hAIF portion within the 509-560 apoptogenic segment. Disruption of interactions at the dimerization surface by production of the hAIF E413A/R422A/R430A mutant resulted in a nondimerizable variant considerably less efficiently stabilizing charge-transfer complexes upon coenzyme reduction than WT hAIF. These data reveal that the coenzyme-mediated monomer-dimer transition of hAIF modulates the conformation of its C-terminal proapoptotic domain, as well as its mechanism as reductase. These observations suggest that both the mitochondrial and apoptotic functions of hAIF are interconnected and coenzyme controlled: a key information in the understanding of the physiological role of AIF in the cellular life and death cycle.
Insights
The apoptosis-inducing factor (AIF) is regulated by coenzyme binding, influencing its mitochondrial and apoptotic functions. This discovery deepens our understanding of cellular life and death cycles.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- The apoptosis-inducing factor (AIF) is a mitochondrial flavoprotein crucial for inducing cell death.
- AIF translocates to the nucleus to mediate chromatinolysis upon cell death induction.
- In mitochondria, AIF exists in a monomer-dimer equilibrium influenced by NADH.
Purpose of the Study:
- To elucidate the structural and functional roles of NAD(H) binding to human AIF (hAIF).
- To investigate how coenzyme binding affects hAIF's monomer-dimer transition and apoptotic activity.
Main Methods:
- Crystal structure determination of hAIF bound to NAD(H).
- Surface plasmon resonance (SPR) to confirm hAIF:NAD(H) stoichiometry in solution.
- Site-directed mutagenesis to study the role of dimerization surface residues.
Main Results:
- The crystal structure revealed an unexpected 1:2 hAIF:NAD(H) binding stoichiometry per protomer.
- A novel NAD(H)-binding site was identified, including residues linked to human disorders.
- Disruption of dimerization via mutagenesis reduced the efficiency of charge-transfer complex stabilization.
- Coenzyme binding induces conformational changes in the apoptogenic C-terminal domain.
Conclusions:
- Coenzyme binding to hAIF modulates its monomer-dimer transition and reductase activity.
- The mitochondrial and apoptotic functions of hAIF are interconnected and controlled by coenzymes.
- This provides key insights into the physiological role of AIF in cellular life and death.
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