Highly restricted deletion of the SNORD116 region is implicated in Prader-Willi Syndrome
Eric Bieth1, Sanaa Eddiry2, Véronique Gaston1
1Service de Génétique Médicale, CHU Toulouse-Purpan, Hôpital Purpan, Place du Docteur Baylac, Toulouse, France.
Insights
A rare deletion in the SNORD116 gene cluster, crucial for Prader-Willi Syndrome (PWS) development, was identified in a patient and her father. This finding reinforces the role of SNORD116 in PWS pathogenesis.
Area of Science:
- Genetics
- Molecular Biology
- Neuroscience
Background:
- Prader-Willi Syndrome (PWS) is a complex genetic disorder associated with the 15q11-13 region, characterized by obesity and neurobehavioral issues.
- PWS is linked to paternally expressed genes, including the SNORD116 gene cluster.
Observation:
- A 23-year-old woman presented with PWS clinical criteria, including behavioral and nutritional problems, obesity, developmental delay, and hyperghrelinemia.
- A highly restricted, 118 kb paternal deletion of the SNORD116 gene cluster was identified in the patient.
Findings:
- The identified deletion, the shortest reported to date, was also present in the patient's father, confirming paternal transmission.
- This case provides strong evidence for the critical role of the paternal SNORD116 gene cluster in PWS pathogenesis.
Implications:
- Targeted analysis of the SNORD116 gene cluster should be considered alongside SNRPN methylation analysis for PWS diagnosis.
- This research deepens the understanding of PWS etiology and highlights the importance of specific gene clusters in complex disorders.
Abstract:
The SNORD116 locus lies in the 15q11-13 region of paternally expressed genes implicated in Prader-Willi Syndrome (PWS), a complex disease accompanied by obesity and severe neurobehavioural disturbances. Cases of PWS patients with a deletion encompassing the SNORD116 gene cluster, but preserving the expression of flanking genes, have been described. We report a 23-year-old woman who presented clinical criteria of PWS, including the behavioural and nutritional features, obesity, developmental delay and endocrine dysfunctions with hyperghrelinemia. We found a paternally transmitted highly restricted deletion of the SNORD116 gene cluster, the shortest described to date (118 kb). This deletion was also present in the father. This finding in a human case strongly supports the current hypothesis that lack of the paternal SNORD116 gene cluster has a determinant role in the pathogenesis of PWS. Moreover, targeted analysis of the SNORD116 gene cluster, complementary to SNRPN methylation analysis, should be carried out in subjects with a phenotype suggestive of PWS.
Related Concept Videos
Genomic Imprinting and Inheritance
The expression of some genes depends on which parent passed the gene to the offspring, through a phenomenon known as...
Pleiotropy
Alternative RNA Splicing
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Single Nucleotide Polymorphisms-SNPs
Incomplete Dominance


